RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 HOXA3O43365 443 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-207ENST00000467985 DHRS3O75911 302 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 IGLV3-1P01715 115 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 HSPA13P48723 471 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 IL13RA1P78552 427 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 TTC23Q5W5X9 447 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 BCDIN3DQ7Z5W3 292 aaKnown RBP15.76■□□□□ 0.11
COL7A1-207ENST00000467985 TMEM86BQ8N661 226 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 KIR3DL3Q8N743 410 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 LY6G5BQ8NDX9 201 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF671Q8TAW3 534 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 IL4I1Q96RQ9 567 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF747Q9BV97 191 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 FGF23Q9GZV9 251 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-207ENST00000467985 WDR13Q9H1Z4 485 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 OR51I2Q9H344 312 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 FAM118AQ9NWS6 357 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 WARS2Q9UGM6 360 aaKnown RBP15.76■□□□□ 0.11
COL7A1-207ENST00000467985 PIGLQ9Y2B2 252 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 IGHV1-69DA0A0B4J2H0 117 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 LOC100130705A0A1B0GUX0 176 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 A0A1B0GVI7 797 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 MDFIC2A0A1B0GVS7 189 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF732B4DXR9 585 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 LOC110117498-PIK3R3F6TDL0 507 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 H0YJX3 145 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 AKR7A2O43488 359 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 IGHV1-69P01742 117 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 GMFBP60983 142 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 IKZF1Q13422 519 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 BCL2L15Q5TBC7 163 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 SHISA2Q6UWI4 295 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 Q6YL49 198 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF788Q6ZQV5 615 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 OR5T2Q8NGG2 359 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 LHX4Q969G2 390 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 SEH1LQ96EE3 360 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 APOL4Q9BPW4 351 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 ADI1Q9BV57 179 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 TTTY10Q9BZA0 68 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 ACOXLQ9NUZ1 547 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 ONECUT1Q9UBC0 465 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 GTF2A1LQ9UNN4 478 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 POMT1Q9Y6A1 747 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 R4GMQ9 66 aa15.75■□□□□ 0.11
COL7A1-207ENST00000467985 A0A1B0GW55 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 OR2AT4A6NND4 320 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 POM121CA8CG34 1229 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 SRSF10O75494 262 aaKnown RBP15.74■□□□□ 0.11
COL7A1-207ENST00000467985 NRASP01111 189 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 TTRP02766 147 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L2P0CJ85 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L3P0CJ86 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L4P0CJ87 422 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L5P0CJ88 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L6P0CJ89 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L7P0CJ90 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 FAHP16930 419 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 GLRA1P23415 457 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 CAPGP40121 348 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 MFGE8Q08431 387 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-207ENST00000467985 CEP78Q5JTW2 689 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF684Q5T5D7 378 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 PLCXD3Q63HM9 321 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 RUSC1-AS1Q66K80 236 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4L9Q6RFH8 374 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-207ENST00000467985 MOB3CQ70IA8 216 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 ELMOD2Q8IZ81 293 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 OR51G2Q8NGK0 314 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 ANGPTL6Q8NI99 470 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 C8orf46Q8TAG6 207 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 TMIGD2Q96BF3 282 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 HRASLS5Q96KN8 279 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DCTN5Q9BTE1 182 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 SNTG1Q9NSN8 517 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 RASL12Q9NYN1 266 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 NLKQ9UBE8 527 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DUX4Q9UBX2 424 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 PCDHGB1Q9Y5G3 927 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 SNX5Q9Y5X3 404 aa15.74■□□□□ 0.11
COL7A1-207ENST00000467985 DHRS7CA6NNS2 312 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 SIGLEC5O15389 551 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 KRT8P05787 483 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 ACAA1P09110 424 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-207ENST00000467985 AMY2BP19961 511 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 HTR1FP30939 366 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 CAV3P56539 151 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 TMED1Q13445 227 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 VMO1Q7Z5L0 202 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 FGFRL1Q8N441 504 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 SETD9Q8NE22 299 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 OR8J1Q8NGP2 316 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 NPRL2Q8WTW4 380 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 SSMEM1Q8WWF3 244 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 AQP3Q92482 292 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 GAFA1Q96PS6 74 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 SLC25A10Q9UBX3 287 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-207ENST00000467985 MRM2Q9UI43 246 aaKnown RBP15.73■□□□□ 0.11
COL7A1-207ENST00000467985 OR52A1Q9UKL2 312 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms