RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SLITRK2Q9H156 845 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 CHODLQ9H9P2 273 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 TCF7L1Q9HCS4 588 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 TXNL4BQ9NX01 149 aaKnown RBP12.83□□□□□ -0.36
NPHP4-205ENST00000466897 GSTK1Q9Y2Q3 226 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 IGKV1-27A0A075B6S5 117 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 TRAV1-2A0A0B4J238 106 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 FAM230AA0A1W2PPH8 454 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 A0A1W2PPK0 400 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 J3QT63 122 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 NDUFS8O00217 210 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 GRPP07492 148 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 HCKP08631 526 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-205ENST00000466897 OCMP0CE72 109 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-205ENST00000466897 CD37P11049 281 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
NPHP4-205ENST00000466897 MTCP1P56278 107 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 IL24Q13007 206 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 MPPED2Q15777 294 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 HFEQ30201 348 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 PRAMEF6Q5VXH4 476 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 MOGAT3Q86VF5 341 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 C1orf87Q8N0U7 546 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 SCCPDHQ8NBX0 429 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 OR11L1Q8NGX0 322 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 OR10Z1Q8NGY1 313 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 TRMT10AQ8TBZ6 339 aaKnown RBP12.82□□□□□ -0.36
NPHP4-205ENST00000466897 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 FUNDC2Q9BWH2 189 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 SNTG1Q9NSN8 517 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
NPHP4-205ENST00000466897 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 MYL9P24844 172 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 GIFP27352 417 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 PMELP40967 661 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 HAAOP46952 286 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 TMEM33P57088 247 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 KISS1Q15726 138 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 CRIP3Q6Q6R5 217 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 WDR82Q6UXN9 313 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 LRRTM1Q86UE6 522 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 LYPD6Q86Y78 171 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 SAXO1Q8IYX7 474 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 ZSCAN4Q8NAM6 433 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-205ENST00000466897 OR52N4Q8NGI2 321 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 NPRL2Q8WTW4 380 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 AQP3Q92482 292 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 TMIGD2Q96BF3 282 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 ORAI1Q96D31 301 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 UQCC2Q9BRT2 126 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 METTL17Q9H7H0 456 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-205ENST00000466897 TMEM106BQ9NUM4 274 aa12.81□□□□□ -0.36
NPHP4-205ENST00000466897 PRRC2AP48634 2157 aaKnown RBP12.81□□□□□ -0.36
NPHP4-205ENST00000466897 A6NLC8 198 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 TMEM178BH3BS89 294 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 AIREO43918 545 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 SSX4O60224 188 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 LY6HO94772 140 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 GABARAPO95166 117 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 LHBP01229 141 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 IRF2P14316 349 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 ADRA2CP18825 462 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 COL8A2P25067 703 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 CFPP27918 469 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 ZNF93P35789 620 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 MTNR1BP49286 362 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 PDLIM4P50479 330 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 PSMD7P51665 324 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 ZP1P60852 638 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 RIN1Q13671 783 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 DMRTC1Q5HYR2 192 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 SHEQ5VZ18 495 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 C22orf42Q6IC83 251 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 HAGHLQ6PII5 290 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 ZNF525Q8N782 197 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 ZNF671Q8TAW3 534 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 CCL17Q92583 94 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 RPL3LQ92901 407 aaKnown RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 KCTD7Q96MP8 289 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 CHCHD6Q9BRQ6 235 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
NPHP4-205ENST00000466897 UFSP2Q9NUQ7 469 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
NPHP4-205ENST00000466897 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 CLDN25C9JDP6 229 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 CDIPTO14735 213 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 CDC14BO60729 498 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 MAS1P04201 325 aa12.79□□□□□ -0.36
NPHP4-205ENST00000466897 PDZK1IP1Q13113 114 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms