RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IGKV6-21A0A0C4DH24 114 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 J3QT63 122 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 RFXANKO14593 260 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRMT5O14744 637 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 POLR1CO15160 346 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 POLR3GO15318 223 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 VAPBO95292 243 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 MAS1P04201 325 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 TPM1P09493 284 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 NELFEP18615 380 aaKnown RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 IL3RAP26951 378 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 TAS2R43P59537 309 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 XIAPP98170 497 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 DMC1Q14565 340 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 MAPRE2Q15555 327 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 TOMM34Q15785 309 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 LY6EQ16553 131 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 LIN9Q5TKA1 542 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 PID1Q7Z2X4 250 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 ORMDL3Q8N138 153 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 CA13Q8N1Q1 262 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 SLC25A29Q8N8R3 303 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 LRRC39Q96DD0 335 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZBED3Q96IU2 234 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNF2Q9BSG1 426 aaPredicted RBP2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 ANKHQ9HCJ1 492 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 IL37Q9NZH6 218 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 VAPAQ9P0L0 249 aa2.46□□□□□ -2.02
CDC42BPA-211ENST00000466538 IGHV6-1A0A0B4J1U7 121 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 A0A1W2PQ67 120 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 BTNL10A8MVZ5 291 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 LHBP01229 141 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 BGNP21810 368 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 MPV17P39210 176 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 PSMB2P49721 201 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 IFFO1Q0D2I5 559 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 CDNFQ49AH0 187 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 TTC32Q5I0X7 151 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRSS54Q6PEW0 395 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 MORN3Q6PF18 240 aaPredicted RBP2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 SLC25A34Q6PIV7 304 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 NT5DC3Q86UY8 548 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 CYB561A3Q8NBI2 242 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR6K2Q8NGY2 324 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 CPNE4Q96A23 557 aaPredicted RBP2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 S100PBPQ96BU1 408 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 SIKE1Q9BRV8 207 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 C1orf50Q9BV19 199 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 SCRT1Q9BWW7 348 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 FRMD8P1Q9BZ68 369 aaPredicted RBP2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 TBL1XR1Q9BZK7 514 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 CHRNA10Q9GZZ6 450 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 TMEM100Q9NV29 134 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 PPIL1Q9Y3C6 166 aa2.45□□□□□ -2.02
CDC42BPA-211ENST00000466538 FAM240AA0A1B0GVK7 77 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 A8MUU9 505 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNF593O00488 134 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR7C2O60412 319 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZMPSTE24O75844 475 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 CDRT1O95170 752 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 NTF3P20783 257 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 CCNOP22674 350 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 MPIP34949 423 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 P2RY2P41231 377 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 GALR1P47211 349 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 RGS6P49758 472 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 RGS19P49795 217 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 MAD2L1BPQ15013 274 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 TAL2Q16559 108 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 DNLZQ5SXM8 178 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 C6orf183Q5T699 404 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 SYT6Q5T7P8 510 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 EPGNQ6UW88 154 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 ST13P4Q8IZP2 240 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZCCHC24Q8N2G6 241 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 SYS1Q8N2H4 156 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 LRRC52Q8N7C0 313 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR2Z1Q8NG97 314 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR52N1Q8NH53 320 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 RMI2Q96E14 147 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 MSANTD3Q96H12 275 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 GPR82Q96P67 336 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 CTRCQ99895 268 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 ULBP2Q9BZM5 246 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 COA1Q9GZY4 146 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 PORCNQ9H237 461 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 HAUS4Q9H6D7 363 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 TAS2R5Q9NYW4 299 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 STK38LQ9Y2H1 464 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 AP3M1Q9Y2T2 418 aa2.44□□□□□ -2.02
CDC42BPA-211ENST00000466538 KIF26AQ9ULI4 1882 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 YEATS2Q9ULM3 1422 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 PCM1Q15154 2024 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 A0A0G2JMP0 313 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 A0A0X1KG70 313 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 TMEM72A0PK05 275 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms