RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 PIGCQ92535 297 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 RNF170Q96K19 258 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 FGF23Q9GZV9 251 aaPredicted RBP7.91□□□□□ -1.14
USP39-212ENST00000465514 RGCCQ9H4X1 137 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 CMC2Q9NRP2 79 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 ACTR3BQ9P1U1 418 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 HERC2O95714 4834 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 TCRBV5S2A0A599 114 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 H3BUX3 64 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 M0R1W7 72 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 SIGLEC5O15389 551 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 ST8SIA5O15466 376 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 HOXD3P31249 432 aaPredicted RBP7.9□□□□□ -1.14
USP39-212ENST00000465514 GABRA2P47869 451 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 CAV3P56539 151 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 ACSM1Q08AH1 577 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 BLMHQ13867 455 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 FAM76BQ5HYJ3 339 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 OR2T5Q6IEZ7 315 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 RNF144BQ7Z419 303 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 BEND2Q8NDZ0 799 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 OR4C13Q8NGP0 309 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 OR2T29Q8NH02 315 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 OR2T6Q8NHC8 308 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 TEX47Q8TBZ9 253 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 THEM6Q8WUY1 208 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 C17orf50Q8WW18 174 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 HPSE2Q8WWQ2 592 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 DUS3LQ96G46 650 aaKnown RBP7.9□□□□□ -1.14
USP39-212ENST00000465514 LYZL4Q96KX0 146 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 NIPSNAP1Q9BPW8 284 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 OR51V1Q9H2C8 321 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 MAGIXQ9H6Y5 334 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 METTL8Q9H825 291 aaKnown RBP7.9□□□□□ -1.14
USP39-212ENST00000465514 REEP1Q9H902 201 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 ELL3Q9HB65 397 aaPredicted RBP7.9□□□□□ -1.14
USP39-212ENST00000465514 ABCB9Q9NP78 766 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 NDE1Q9NXR1 346 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 NLKQ9UBE8 527 aa7.9□□□□□ -1.14
USP39-212ENST00000465514 SAMHD1Q9Y3Z3 626 aaKnown RBP7.9□□□□□ -1.14
USP39-212ENST00000465514 IGKV1D-17A0A075B6S4 117 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 OR2AT4A6NND4 320 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 H0YAE9 185 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 H3BN98 237 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 SELENOFO60613 162 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 RHBDL1O75783 438 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 LYNP07948 512 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 PAICSP22234 425 aaKnown RBP7.89□□□□□ -1.15
USP39-212ENST00000465514 GLRA1P23415 457 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 DCTDP32321 178 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 KIR2DS4P43632 304 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
USP39-212ENST00000465514 GPM6AP51674 278 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 LY6EQ16553 131 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 HCP5Q6MZN7 132 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 CD300LDQ6UXZ3 194 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 ZDHHC23Q8IYP9 409 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 ZNRF1Q8ND25 227 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 OR10G2Q8NGC3 310 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 OR8B12Q8NGG6 310 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 OTOSQ8NHW6 89 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 RORBQ92753 470 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 AJUBAQ96IF1 538 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 HIST1H2AAQ96QV6 131 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 FEVQ99581 238 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 SSX3Q99909 188 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 CITED2Q99967 270 aaPredicted RBP7.89□□□□□ -1.15
USP39-212ENST00000465514 TAS2R1Q9NYW7 299 aa7.89□□□□□ -1.15
USP39-212ENST00000465514 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
USP39-212ENST00000465514 HUWE1Q7Z6Z7 4374 aaKnown RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 PRR23D1E9PI22 279 aaPredicted RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 ANGPTL7O43827 346 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 PRR23D2P0DMB1 279 aaPredicted RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 PSG2P11465 335 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 PAX6P26367 422 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 SLC35A2P78381 396 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 MS4A2Q01362 244 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 DCTN2Q13561 401 aaKnown RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 GINS1Q14691 196 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 FAM98BQ52LJ0 330 aaKnown RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 NKAPLQ5M9Q1 402 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 LCN8Q6JVE9 175 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 PLBD1Q6P4A8 553 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 DHFR2Q86XF0 187 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 FAM185AQ8N0U4 392 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 PAPD5Q8NDF8 572 aaKnown RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 OR51G2Q8NGK0 314 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 OR5D13Q8NGL4 314 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 GIPC3Q8TF64 312 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 FAM234AQ9H0X4 552 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 OR51I2Q9H344 312 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 YY1AP1Q9H869 796 aa7.88□□□□□ -1.15
USP39-212ENST00000465514 NKX1-2Q9UD57 310 aaPredicted RBP7.88□□□□□ -1.15
USP39-212ENST00000465514 ZNF222Q9UK12 451 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms