RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PBOV1Q9GZY1 135 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 RNF114Q9Y508 228 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 TRBV23-1A0A0A0MS06 115 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 BTBD17A6NE02 478 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 KCNAB3O43448 404 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 RHBDL1O75783 438 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 DNAJC8O75937 253 aaPredicted RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 PSG2P11465 335 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 NDUFB7P17568 137 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 DAPP51397 102 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 RIDAP52758 137 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 PROK1P58294 105 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 ACTR3P61158 418 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 BLMHQ13867 455 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 PTGES3Q15185 160 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 MEPCEQ7L2J0 689 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 OR5R1Q8NH85 324 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 OR51E1Q8TCB6 317 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 UTP4Q969X6 686 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 CNN2Q99439 309 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 C16orf95Q9H693 158 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 GPR84Q9NQS5 396 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 ENPP5Q9UJA9 477 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 VPREB3Q9UKI3 123 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 TGP01266 2768 aa11.77□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PQ09 198 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 PRR32B1ATL7 298 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 M0QZ24 198 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 PSMD9O00233 223 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 TIMM23O14925 209 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 PRKYO43930 277 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 MTRF1O75570 445 aaKnown RBP11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 DHRS3O75911 302 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 MRPL3P09001 348 aaKnown RBP11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 GABRA2P47869 451 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 EFNB1P98172 346 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 TAF9Q16594 264 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 CEP78Q5JTW2 689 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 MOB3CQ70IA8 216 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 COMMD2Q86X83 199 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 OR5K1Q8NHB7 308 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 DUS3LQ96G46 650 aaKnown RBP11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
SNRNP40-203ENST00000463988 SLC22A31A6NKX4 558 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 SRSF10O75494 262 aaKnown RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 TSPAN9O75954 239 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 PAHP00439 452 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 NRASP01111 189 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 TTRP02766 147 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 TFF1P04155 84 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 FAHP16930 419 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 SAA4P35542 130 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 TGFBR2P37173 567 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 KLRD1Q13241 179 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 SMIM21Q3B7S5 101 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 MIDNQ504T8 468 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNF684Q5T5D7 378 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 AADACL4Q5VUY2 407 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 TMEM42Q69YG0 159 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 DHRS7BQ6IAN0 325 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNF322Q6U7Q0 402 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 Q6ZSR3 168 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 Q6ZSV7 163 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNF573Q86YE8 665 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 POC1AQ8NBT0 407 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 BCAS4Q8TDM0 211 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 SEMA6AQ9H2E6 1030 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 IKZF2Q9UKS7 526 aa11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 SF3B6Q9Y3B4 125 aaKnown RBP11.75□□□□□ -0.53
SNRNP40-203ENST00000463988 MEIOCA2RUB1 952 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 DHRS7CA6NNS2 312 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 ZAR1LA6NP61 321 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 LOC110117498-PIK3R3F6TDL0 507 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 J3QT63 122 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 DLGAP1O14490 977 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 DYNC1I1O14576 645 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 CLVS2Q5SYC1 327 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 SLX4IPQ5VYV7 408 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 ELMOD2Q8IZ81 293 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 BEND2Q8NDZ0 799 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms