RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 LOXL1Q08397 574 aaPredicted RBP2.62□□□□□ -1.99
USH2A-203ENST00000463147 COTL1Q14019 142 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 CEACAM16Q2WEN9 425 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 MPV17L2Q567V2 206 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 TTC32Q5I0X7 151 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 SSX6Q7RTT6 188 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 WDFY1Q8IWB7 410 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 RIMKLAQ8IXN7 391 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 MNS1Q8NEH6 495 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 OR4K5Q8NGD3 323 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 CIRBP-AS1Q8TBR5 109 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 ZFAND1Q8TCF1 268 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 RERGQ96A58 199 aaPredicted RBP2.62□□□□□ -1.99
USH2A-203ENST00000463147 FLYWCH2Q96CP2 140 aaKnown RBP2.62□□□□□ -1.99
USH2A-203ENST00000463147 MED10Q9BTT4 135 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 C8orf17Q9NRJ1 99 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 ANXA10Q9UJ72 324 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 ZNF222Q9UK12 451 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 SLC22A14Q9Y267 594 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 FARSAQ9Y285 508 aaKnown RBP2.62□□□□□ -1.99
USH2A-203ENST00000463147 FADS3Q9Y5Q0 445 aa2.62□□□□□ -1.99
USH2A-203ENST00000463147 LRPPRCP42704 1394 aaKnown RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 TRAV19A0A0A6YYK7 116 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 IGHV3-72A0A0B4J1Y9 119 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 TRAV8-6A0A0B4J262 113 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 A0A1B0GX12 115 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 WI2-2373I1.2A0A1W2PRP0 233 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 VGLL3A8MV65 326 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 H0YJW9 148 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 M0R1X1 148 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 MANBAO00462 879 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 ZNF207O43670 478 aaKnown RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 NDUFS5O43920 106 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 SLC22A5O76082 557 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 PRKCDQ05655 676 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 OR4D1Q15615 310 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 RNASE13Q5GAN3 156 aaKnown RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 OR10J3Q5JRS4 329 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 COQ8AQ8NI60 647 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 NT5CQ8TCD5 201 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 RNASEH2CQ8TDP1 164 aaKnown RBP2.61□□□□□ -1.99
USH2A-203ENST00000463147 DDI1Q8WTU0 396 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 CDS1Q92903 461 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 TMEM159Q96B96 161 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 S100PBPQ96BU1 408 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 CAMK2N2Q96S95 79 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 VAT1Q99536 393 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 SFXN3Q9BWM7 321 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 TOLLIPQ9H0E2 274 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 PLEKHF2Q9H8W4 249 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 C6orf50Q9HD87 102 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 C12orf4Q9NQ89 552 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 SLC7A11Q9UPY5 501 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 HES2Q9Y543 173 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 ORC6Q9Y5N6 252 aa2.61□□□□□ -1.99
USH2A-203ENST00000463147 IGHV6-1A0A0B4J1U7 121 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 PINLYPA6NC86 204 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 ZNF705GA8MUZ8 300 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 J3QLI3 93 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 TAAR5O14804 337 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SPAG7O75391 227 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 ADAP1O75689 374 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 DHRS3O75911 302 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SLC25A14O95258 325 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 GIMD1P0DJR0 217 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 PSG2P11465 335 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 MDKP21741 143 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 IL3RAP26951 378 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 KDELR2P33947 212 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 APLNRP35414 380 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 TAS2R31P59538 309 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 TSPAN5P62079 268 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 DEFB116Q30KQ4 102 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 BSXQ3C1V8 233 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SMUG1Q53HV7 270 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 HSP90B2PQ58FF3 399 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SYT6Q5T7P8 510 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 HHATQ5VTY9 493 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 IGFL2Q6UWQ7 119 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 BHLHA15Q7RTS1 189 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 LRRC6Q86X45 466 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 MKXQ8IYA7 352 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 PGAM4Q8N0Y7 254 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 ZNF786Q8N393 782 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SPICQ8N5J4 248 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 ZNF738Q8NE65 137 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SFXN5Q8TD22 340 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 DCAKDQ8WVC6 231 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 SRSF12Q8WXF0 261 aaKnown RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 RORBQ92753 470 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 RBMXL1Q96E39 390 aaKnown RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 PDXPQ96GD0 296 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 EMC6Q9BV81 110 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 TMED9Q9BVK6 235 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 CCDC94Q9BW85 323 aaPredicted RBP2.6□□□□□ -1.99
USH2A-203ENST00000463147 SHCBP1LQ9BZQ2 653 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms