RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 WNT5BQ9H1J7 359 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PPIL3Q9H2H8 161 aaKnown RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 TPK1Q9H3S4 243 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PLSCR4Q9NRQ2 329 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 DDX28Q9NUL7 540 aaKnown RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 FAM206AQ9NX38 181 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 CCDC59Q9P031 241 aaKnown RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 FAM215AQ9Y5M1 114 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 NBASA2RRP1 2371 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PHF3Q92576 2039 aaKnown RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TRAV1-2A0A0B4J238 106 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ACOD1A6NK06 481 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 F5H5K5 113 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 H3BSH0 61 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 HSPB6O14558 160 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 SYNGR3O43761 229 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 SLC25A17O43808 307 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 DOK2O60496 412 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TNFSF13O75888 250 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 CLPXO76031 633 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TOXO94900 526 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 APOC1P02654 83 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MMP7P09237 267 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 UCHL1P09936 223 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 OCM2P0CE71 109 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MYL9P24844 172 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MAPK3P27361 379 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 CX3CR1P49238 355 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF121P58317 390 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TGFBR3Q03167 851 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 RBPJQ06330 500 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 RSPO1Q2MKA7 263 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 EIF2S3LQ2VIR3 472 aaKnown RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF404Q494X3 552 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 SLC36A2Q495M3 483 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 HSD17B12Q53GQ0 312 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 Q5PR19 223 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TMEM244Q5VVB8 128 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TMEM53Q6P2H8 277 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 C3P1Q6ZMU1 363 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 Q6ZT83 130 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 LUZP2Q86TE4 346 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TPRA1Q86W33 373 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 DOLPP1Q86YN1 238 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ELMOD2Q8IZ81 293 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF843Q8N446 348 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 RPRMLQ8N4K4 120 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 OR51A4Q8NGJ6 313 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 OR1K1Q8NGR3 316 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 OR10AC1Q8NH08 325 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 OR1F12Q8NHA8 337 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 AKR7LQ8NHP1 331 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MCFD2Q8NI22 146 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 TSEN15Q8WW01 171 aaKnown RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 THRSPQ92748 146 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 BCL2L2Q92843 193 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 SLC25A46Q96AG3 418 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 STARD4Q96DR4 205 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZFP3Q96NJ6 502 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 DACH2Q96NX9 599 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 DERL3Q96Q80 235 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 BARHL1Q9BZE3 327 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 HDHD2Q9H0R4 259 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 FAM234AQ9H0X4 552 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MMP27Q9H306 513 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 MOB1AQ9H8S9 216 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 NOX4Q9NPH5 578 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF224Q9NZL3 707 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 NUFIP1Q9UHK0 495 aaKnown RBP6.3□□□□□ -1.4
UBE4B-204ENST00000462658 HHLA2Q9UM44 414 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 PROCRQ9UNN8 238 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF835Q9Y2P0 537 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 N6AMT1Q9Y5N5 214 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 A3GALT2U3KPV4 340 aa6.3□□□□□ -1.4
UBE4B-204ENST00000462658 A0A075B6Q4 140 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ARPC4-TTLL3A0A0A6YYG9 625 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 LOC107986453A0A1B0GWG9 222 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 CIB4A0PJX0 185 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SMIM30A4D0T7 59 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 OR6C6A6NF89 314 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 FAM157AC9JC47 383 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 M0R135 149 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 P2RY10O00398 339 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 PDCD5O14737 125 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 PIN1P1O15428 100 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SLC19A2O60779 497 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 UBL3O95164 117 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 CGAP01215 116 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 HLA-HP01893 362 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 TTRP02766 147 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 RAF1P04049 648 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ISG15P05161 165 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ACSM4P0C7M7 580 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 UBCP0CG48 685 aaKnown RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SLC2A1P11166 492 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 CD79AP11912 226 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SRMP19623 302 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 RAB3BP20337 219 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ACHEP22303 614 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms