RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NKX6-3A6NJ46 265 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TRAPPC2LH3BP13 241 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 LGALS8O00214 317 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 CDIPTO14735 213 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 SULT1B1O43704 296 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ARL6IP5O75915 188 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ALX3O95076 343 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 FSTL3O95633 263 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 CYB5R3P00387 301 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-206ENST00000462613 INHBBP09529 407 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 RPS2P15880 293 aaKnown RBP5.38□□□□□ -1.55
SF3B1-206ENST00000462613 MUC1P15941 1255 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ATF1P18846 271 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ANOS1P23352 680 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 GLRA1P23415 457 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 PSMB9P28065 219 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 THBS2P35442 1172 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 CFHR2P36980 270 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 POU3F4P49335 361 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 IRF3Q14653 427 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 MPPED2Q15777 294 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 SMIM21Q3B7S5 101 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ESCO2Q56NI9 601 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 FAM76BQ5HYJ3 339 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 LIPKQ5VXJ0 399 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 XAF1Q6GPH4 301 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF773Q6PK81 442 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 WDR82Q6UXN9 313 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 SLC36A1Q7Z2H8 476 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 BIVMQ86UB2 503 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 SATL1Q86VE3 508 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 NKAIN3Q8N8D7 197 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF485Q8NCK3 441 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 OR51A4Q8NGJ6 313 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 OR13C9Q8NGT0 318 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 RPS4Y2Q8TD47 263 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 HPSE2Q8WWQ2 592 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 PHYHIPQ92561 330 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TMIGD2Q96BF3 282 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ADAT3Q96EY9 351 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-206ENST00000462613 OR5M11Q96RB7 305 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 NR1H4Q96RI1 486 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TMED9Q9BVK6 235 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TLNRD1Q9H1K6 362 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TCF7L1Q9HCS4 588 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM138Q9NPI0 162 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 ACOT13Q9NPJ3 140 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 PCDHB16Q9NRJ7 776 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 RASL12Q9NYN1 266 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 MIOXQ9UGB7 285 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 GLS2Q9UI32 602 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 FOXJ3Q9UPW0 622 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 CACNG2Q9Y698 323 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 MALRD1Q5VYJ5 2156 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TEX15Q9BXT5 2789 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 PQLC2LA1A4F0 135 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 CYSRT1A8MQ03 144 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 B4DSR2 109 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 C3orf80F5H4A9 247 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 CCRL2O00421 344 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 FOXH1O75593 365 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 RGS9O75916 674 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 NXPH2O95156 264 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 LALBAP00709 142 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 PLATP00750 562 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV2-70P01814 119 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 ALDOBP05062 364 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM225BP0DP42 221 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 CPEP16870 476 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 FSTP19883 344 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 MYL9P24844 172 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 BDKRB2P30411 391 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 GABRA5P31644 462 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TGFBR2P37173 567 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 MAP2K4P45985 399 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 NPY4RP50391 375 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 BMXP51813 675 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 GNB2P62879 340 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 EMX1Q04741 257 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 IL24Q13007 206 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TPBGQ13641 420 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 DOC2BQ14184 412 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 UBE2V2Q15819 145 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 NEDD8Q15843 81 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TIMM50Q3ZCQ8 353 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 ARMCX4Q5H9R4 360 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 DDI2Q5TDH0 399 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 CYB5R2Q6BCY4 276 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF826PQ6ZT77 177 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 LRRC28Q86X40 367 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 SPARTQ8N0X7 666 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TEX29Q8N6K0 151 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 TSPAN14Q8NG11 270 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 OR8B3Q8NGG8 313 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 OR10AC1Q8NH08 325 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 CLDND2Q8NHS1 167 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 AQP3Q92482 292 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms