RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ZNF404Q494X3 552 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ZNF826PQ6ZT77 177 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ZFP41Q8N8Y5 198 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ZNF671Q8TAW3 534 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 LRRC29Q8WV35 223 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 RGP1Q92546 391 aaPredicted RBP9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 THRSPQ92748 146 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 RPL3LQ92901 407 aaKnown RBP9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 BORCS8Q96FH0 119 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 C1orf159Q96HA4 380 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 OR5M11Q96RB7 305 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ZCCHC4Q9H5U6 513 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ZNF665Q9H7R5 613 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ISYNA1Q9NPH2 558 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 POLDIP2Q9Y2S7 368 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 DYSFO75923 2080 aa9.79□□□□□ -0.84
TRAF3IP1-204ENST00000462122 TRAV38-1A0A0B4J264 116 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 OOEPA6NGQ2 149 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 SRRM5B3KS81 715 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 J3QT63 122 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 LGALS8O00214 317 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 NDUFA2O43678 99 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 SULT1B1O43704 296 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 CD5LO43866 347 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ALX3O95076 343 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 IGHV2-5P01817 119 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 IGHV4-31P0DP07 118 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 ATF1P18846 271 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 AZGP1P25311 298 aaKnown RBP9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 HAAOP46952 286 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 RBP2P50120 134 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 LMO4P61968 165 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 HNRNPA0Q13151 305 aaKnown RBP9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 GPR50Q13585 617 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 Q499Y3 187 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 DMRTC1Q5HYR2 192 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 TEX36Q5VZQ5 186 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 CYB5R2Q6BCY4 276 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 HAGHLQ6PII5 290 aaPredicted RBP9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 CLEC9AQ6UXN8 241 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 LHFPL2Q6ZUX7 228 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 SVOPQ8N4V2 548 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 OR13C9Q8NGT0 318 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 AQP3Q92482 292 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 UFD1Q92890 307 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 TMEM106AQ96A25 262 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 C12orf43Q96C57 262 aaKnown RBP9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 PKIBQ9C010 78 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 TMEM165Q9HC07 324 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 PCDHB10Q9UN67 800 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 SVEP1Q4LDE5 3571 aa9.78□□□□□ -0.84
TRAF3IP1-204ENST00000462122 MTORP42345 2549 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 IGKV1-9A0A0C4DH69 117 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TRBV5-5A0A0J9YX44 114 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PNMA8CA0A1B0GUJ8 204 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FAM230AA0A1W2PPH8 454 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 B4DSR2 109 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF205O95201 554 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MUC1P15941 1255 aaPredicted RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MPZP25189 248 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MAPK3P27361 379 aaPredicted RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 IL2RGP31785 369 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CD80P33681 288 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RBMXP38159 391 aaKnown RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SOX2P48431 317 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ATP1B3P54709 279 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 KRTAP1-1Q07627 177 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 IL24Q13007 206 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MLLT11Q13015 90 aaPredicted RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MICBQ29980 383 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 FAM201AQ5SY85 155 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 DCDC5Q6ZRR9 648 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ZNF367Q7RTV3 350 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MS4A15Q8N5U1 240 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 BOLLQ8N9W6 283 aaKnown RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LINC01356Q8N9X3 169 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TRMT10AQ8TBZ6 339 aaKnown RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NPRL2Q8WTW4 380 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MSI2Q96DH6 328 aaKnown RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CPNE2Q96FN4 548 aaPredicted RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 OPALINQ96PE5 141 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 SMR3AQ99954 134 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TMEM246Q9BRR3 403 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 METTL17Q9H7H0 456 aaPredicted RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 PATZ1Q9HBE1 687 aaKnown RBP9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 CKLFQ9UBR5 152 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MIOXQ9UGB7 285 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LRRC42Q9Y546 428 aa9.77□□□□□ -0.85
TRAF3IP1-204ENST00000462122 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 F5H0A9 414 aaPredicted RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 C3orf80F5H4A9 247 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 MAGEB3O15480 346 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 AKR7A2O43488 359 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 NOS1APO75052 506 aaPredicted RBP9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 RHBDL1O75783 438 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 LY6G6DO95868 133 aa9.76□□□□□ -0.85
TRAF3IP1-204ENST00000462122 ACAA1P09110 424 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms