RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 ZNF385CQ66K41 422 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 TANGO2Q6ICL3 276 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 ZNF440Q8IYI8 595 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 OR5D14Q8NGL3 314 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 TSLPQ969D9 159 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 GALNT14Q96FL9 552 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 DUSP15Q9H1R2 295 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 LIME1Q9H400 295 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 WASF3Q9UPY6 502 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 C14orf166Q9Y224 244 aaKnown RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 TMED7-TICAM2A0A0A6YYA0 188 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 PLPP3O14495 311 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 HPNP05981 417 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 BLVRBP30043 206 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 CTNNB1P35222 781 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 PRSS12P56730 875 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 TAS2R60P59551 318 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 FXYD4P59646 89 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 NKX6-1P78426 367 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 POU3F1Q03052 451 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-202ENST00000460593 PRTGQ2VWP7 1150 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 PHLDA2Q53GA4 152 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 SUMF1Q8NBK3 374 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 OR10AD1Q8NGE0 317 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 ABHD5Q8WTS1 349 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 DYRK2Q92630 601 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 SNX22Q96L94 193 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 ZNF700Q9H0M5 742 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 PPP4R1LQ9P1A2 415 aa10.31□□□□□ -0.76
CPSF3-202ENST00000460593 A0A0J9YY10 115 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 GEMIN2O14893 280 aaKnown RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 SOX15O60248 233 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 ISG15P05161 165 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 TBPP20226 339 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 APLNRP35414 380 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 FUT7Q11130 342 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 UBE2V2Q15819 145 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 C6orf201Q7Z4U5 140 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 CYB561D1Q8N8Q1 229 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 HPSE2Q8WWQ2 592 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 C11orf40Q8WZ69 217 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 MVB12AQ96EY5 273 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 RPP25Q9BUL9 199 aaKnown RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 C1orf123Q9NWV4 160 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 SRPK3Q9UPE1 567 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 SLCO1B1Q9Y6L6 691 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 FAM221AA4D161 298 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 A6NCN8 305 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 SEC14L6B5MCN3 397 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 ZNF587BE7ETH6 402 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 GAPDHP04406 335 aaKnown RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 TLE1Q04724 770 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 STX12Q86Y82 276 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 C1QL4Q86Z23 238 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 SULF2Q8IWU5 870 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 LURAP1Q96LR2 239 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 DOCK8Q8NF50 2099 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 OPRM1P35372 400 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 RND3P61587 244 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 KLHL24Q6TFL4 600 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 BMFQ96LC9 184 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 WDR92Q96MX6 357 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 VN1R1Q9GZP7 353 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 GPR84Q9NQS5 396 aa10.3□□□□□ -0.76
CPSF3-202ENST00000460593 MCTS1Q9ULC4 181 aaKnown RBP10.3□□□□□ -0.76
CPSF3-202ENST00000460593 OR5H15A6NDH6 313 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 OR5H1A6NKK0 313 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 E9PLN8 166 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PGA4P0DJD7 388 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PGA5P0DJD9 388 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 GABRR1P24046 479 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 SLC26A5P58743 744 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 NKAIN1Q4KMZ8 207 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 C20orf196Q8IYI0 205 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 ADAMTS18Q8TE60 1221 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 SLC37A2Q8TED4 501 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 NXT1Q9UKK6 140 aaKnown RBP10.29□□□□□ -0.76
CPSF3-202ENST00000460593 CLDN4O14493 209 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 ONECUT2O95948 504 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 GP1BBP13224 206 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 SLC37A1P57057 533 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 MFAP5Q13361 173 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 TMEM176BQ3YBM2 270 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-202ENST00000460593 CARD17Q5XLA6 110 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 OR5L1Q8NGL2 311 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PTPMT1Q8WUK0 201 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-202ENST00000460593 THOC3Q96J01 351 aaKnown RBP10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-202ENST00000460593 GPHA2Q96T91 129 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PBDC1Q9BVG4 233 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 PADI1Q9ULC6 663 aa10.29□□□□□ -0.76
CPSF3-202ENST00000460593 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms