RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 IGHV1-69P01742 117 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 KRT8P05787 483 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 GLRA1P23415 457 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 IL13RA1P78552 427 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 FOXL1Q12952 345 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 CDONQ4KMG0 1287 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 TMEM42Q69YG0 159 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 HAGHLQ6PII5 290 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-203ENST00000460264 GATAD2BQ8WXI9 593 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 AQP3Q92482 292 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 LHX4Q969G2 390 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 ZDHHC16Q969W1 377 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 DCTN5Q9BTE1 182 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 SNX5Q9Y5X3 404 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 V9GYS6 101 aa15.6■□□□□ 0.09
COL5A1-203ENST00000460264 IGKV1D-17A0A075B6S4 117 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 A0A1W2PQL4 384 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-203ENST00000460264 H3BNX3 289 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 SIGLEC5O15389 551 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 ALPLP05186 524 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 OR2T7P0C7T2 308 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 KPNB1Q14974 876 aaKnown RBP15.59■□□□□ 0.09
COL5A1-203ENST00000460264 DGUOKQ16854 277 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 CLVS2Q5SYC1 327 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 ZNF684Q5T5D7 378 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 Q6ZSR3 168 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 KIR3DL3Q8N743 410 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 YIPF7Q8N8F6 280 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 OR14K1Q8NGZ2 314 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 OR2T27Q8NH04 317 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 C8orf46Q8TAG6 207 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 EME1Q96AY2 570 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 MED30Q96HR3 178 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 DMRTB1Q96MA1 342 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 NOX4Q9NPH5 578 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 ONECUT1Q9UBC0 465 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 SLC22A13Q9Y226 551 aa15.59■□□□□ 0.09
COL5A1-203ENST00000460264 A0A1B0GVI7 797 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 DHRS7CA6NNS2 312 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 RPP14O95059 124 aaKnown RBP15.58■□□□□ 0.08
COL5A1-203ENST00000460264 ACAA1P09110 424 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-203ENST00000460264 CCL1P22362 96 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 CDC42P60953 191 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 TMED1Q13445 227 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 Q6YL49 198 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 CCDC121Q6ZUS5 278 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 VMO1Q7Z5L0 202 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 OR10H4Q8NGA5 316 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 ZNF671Q8TAW3 534 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 H1FXQ92522 213 aaKnown RBP15.58■□□□□ 0.08
COL5A1-203ENST00000460264 RFKQ969G6 155 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 TMIGD2Q96BF3 282 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 GPR173Q9NS66 373 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 ACOXLQ9NUZ1 547 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 SLC25A10Q9UBX3 287 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-203ENST00000460264 ZNF222Q9UK12 451 aa15.58■□□□□ 0.08
COL5A1-203ENST00000460264 METTL15A6NJ78 407 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 DLGAP1O14490 977 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 EI24O14681 340 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 PSG2P11465 335 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 CAV3P56539 151 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 ZFP1Q6P2D0 407 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 C16orf87Q6PH81 154 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 CATSPERDQ86XM0 798 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 CMTM4Q8IZR5 234 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 POC1AQ8NBT0 407 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 TAF15Q92804 592 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL5A1-203ENST00000460264 IMPAD1Q9NX62 359 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 USE1Q9NZ43 259 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 PCDHGB1Q9Y5G3 927 aa15.57■□□□□ 0.08
COL5A1-203ENST00000460264 PQLC2LA1A4F0 135 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 J3QT63 122 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 SYNGR1O43759 233 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 SULT1C4O75897 302 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 MELTFP08582 738 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 ATP6V1E1P36543 226 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 GABRA2P47869 451 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 METAP1DQ6UB28 335 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-203ENST00000460264 ZNF573Q86YE8 665 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 PDZD9Q8IXQ8 264 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 Q8N7P7 452 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 RORBQ92753 470 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 UBE2FQ969M7 185 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 HRASLS5Q96KN8 279 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 SIRT7Q9NRC8 400 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 RASL12Q9NYN1 266 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 ORC6Q9Y5N6 252 aa15.56■□□□□ 0.08
COL5A1-203ENST00000460264 A0A0U1RQK1 487 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 A6NIN4 97 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 PGA5P0DJD9 388 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 NDUFB7P17568 137 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 HAAOP46952 286 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ODF4Q2M2E3 257 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 SMIM21Q3B7S5 101 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ACP7Q6ZNF0 438 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ZNRF1Q8ND25 227 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 TRUB1Q8WWH5 349 aaKnown RBP15.55■□□□□ 0.08
COL5A1-203ENST00000460264 SDSLQ96GA7 329 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ZNF488Q96MN9 340 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms