RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 POC1AQ8NBT0 407 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CLRN3Q8NCR9 226 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 OR13G1Q8NGZ3 307 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 OR1F12Q8NHA8 337 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CPNE4Q96A23 557 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM45BQ96B21 275 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 BORCS8Q96FH0 119 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CDX2Q99626 313 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 RBM24Q9BX46 236 aaKnown RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SUCNR1Q9BXA5 334 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 OPA3Q9H6K4 179 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 BCO1Q9HAY6 547 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ELL3Q9HB65 397 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM86C1Q9NVL1 165 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM38BQ9NVV0 291 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SLC39A1Q9NY26 324 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ANXA10Q9UJ72 324 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 PCDHB10Q9UN67 800 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TIMM10BQ9Y5J6 103 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 HS3ST3B1Q9Y662 390 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM218A2RU14 115 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CRYM-AS1A6NIL9 109 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF814B7Z6K7 855 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZIC3O60481 467 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ATG12O94817 140 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 SNAPINO95295 136 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CST4P01036 141 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CFIP05156 583 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM225BP0DP42 221 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CCL3P10147 92 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 LIPCP11150 499 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CD79AP11912 226 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FAHP16930 419 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 GLP1RP43220 463 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FUT6P51993 359 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 UCP3P55916 312 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 MTCP1P56278 107 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CARD18P57730 90 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 SLC9A3R2Q15599 337 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 HMGN3Q15651 99 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 UBE2V2Q15819 145 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 SRSF7Q16629 238 aaKnown RBP eCLIP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 KRTAP27-1Q3LI81 207 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM42Q69YG0 159 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ABLIM2Q6H8Q1 611 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF585AQ6P3V2 769 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 DPPA2Q7Z7J5 298 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM200AQ86VY9 491 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 LRTM2Q8N967 370 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 RELL2Q8NC24 303 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 OR2V1Q8NHB1 315 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 MAFAQ8NHW3 353 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FAM122AQ96E09 287 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 GALNT14Q96FL9 552 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 LRRC46Q96FV0 321 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 REEP6Q96HR9 211 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 NARS2Q96I59 477 aaKnown RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 LYZL4Q96KX0 146 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF75AQ96N20 296 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 TSNAXQ99598 290 aaKnown RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 RTBDNQ9BSG5 229 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ST6GALNAC5Q9BVH7 336 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FN3KRPQ9HA64 309 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF286AQ9HBT8 521 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF701Q9NV72 531 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ASF1BQ9NVP2 202 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 OCIAD1Q9NX40 245 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF319Q9P2F9 582 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 B4GALT7Q9UBV7 327 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 LPAR3Q9UBY5 353 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 NDRG3Q9UGV2 375 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 TUBD1Q9UJT1 453 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 FBXO9Q9UK97 447 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 PADI1Q9ULC6 663 aa7.74□□□□□ -1.17
HDAC3-202ENST00000459727 BOKQ9UMX3 212 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 CARHSP1Q9Y2V2 147 aaKnown RBP7.74□□□□□ -1.17
HDAC3-202ENST00000459727 BORCS7-ASMTA0A0B4J1R7 106 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF816-ZNF321PA0A0X1KG74 233 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 E5RGE8 158 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 K7EPK0 472 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 TOR1AO14656 332 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SYNGR3O43761 229 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RAMP1O60894 148 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RAD51DO75771 328 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 KLF7O75840 302 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 TSPAN9O75954 239 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 COX5BP10606 129 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RPS2P15880 293 aaKnown RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RAB5CP51148 216 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SUPT4H1P63272 117 aaKnown RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 DEFA5Q01523 94 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 PJVKQ0ZLH3 352 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 MALLQ13021 153 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF169Q14929 603 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ABCA11PQ4W5N1 156 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 FAM74A1Q5RGS3 127 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms