RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RNF144BQ7Z419 303 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 COMMD1Q8N668 190 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 OR56B1Q8NGI3 324 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 TMEM234Q8WY98 164 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 C11orf40Q8WZ69 217 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ST8SIA1Q92185 356 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 EMG1Q92979 244 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 HIST1H2BAQ96A08 127 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CPNE2Q96FN4 548 aaPredicted RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 SULT4A1Q9BR01 284 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 TMEM59Q9BXS4 323 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CNTNAP3Q9BZ76 1288 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF700Q9H0M5 742 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 DHCR7Q9UBM7 475 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 TUBD1Q9UJT1 453 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 STARD10Q9Y365 291 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CEP192Q8TEP8 1941 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 TLCD2A6NGC4 264 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF354AO60765 605 aaPredicted RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 JTBO76095 146 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 MPIG6BO95866 241 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CA3P07451 260 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 THEGLP0DJG4 465 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF708P17019 499 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF20P17024 532 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 GABRG2P18507 467 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 NME2P22392 152 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CD80P33681 288 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 THBS4P35443 961 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 WNT5AP41221 380 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ALDH3B1P43353 468 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 BLKP51451 505 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 TAS2R46P59540 309 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CD81P60033 236 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 SPEM2Q0P670 501 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 RIPPLY2Q5TAB7 128 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 RBMS3Q6XE24 437 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF561Q8N587 486 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 OR10H5Q8NGA6 315 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 OR1N1Q8NGS0 311 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 R3HDM4Q96D70 268 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 MVB12AQ96EY5 273 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 C14orf79Q96F83 325 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ARHGAP5-AS1Q96IT6 56 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 TGM7Q96PF1 710 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CLCC1Q96S66 551 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 LRRC61Q9BV99 259 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 SCRT1Q9BWW7 348 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 MRPL13Q9BYD1 178 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 ARV1Q9H2C2 271 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CHST11Q9NPF2 352 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 SLC22A11Q9NSA0 550 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CUTCQ9NTM9 273 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 B3GALT5Q9Y2C3 310 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CDH23Q9H251 3354 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 EML6Q6ZMW3 1958 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 IGHV5-51A0A0C4DH38 117 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 A0A0U1RQV5 110 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 A0A1W2PNV4 684 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 FAM221AA4D161 298 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 ANKUB1A6NFN9 424 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 ZNF878C9JN71 531 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 CA11O75493 328 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 SLC2A1P11166 492 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 ZNF17P17021 662 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 PI3P19957 117 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 AMY2BP19961 511 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 GLRA1P23415 457 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 G0S2P27469 103 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 RPL12P30050 165 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 APOBEC1P41238 236 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 ECI1P42126 302 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 OR3A4PP47883 348 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 CSNK1EP49674 416 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 POU3F1Q03052 451 aaPredicted RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 RBM39Q14498 530 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 HNF4GQ14541 408 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 C9orf152Q5JTZ5 239 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 OPN5Q6U736 354 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 Q6ZRG5 221 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 UBAC2Q8NBM4 344 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 OR51E1Q8TCB6 317 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 DAZLQ92904 295 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 URM1Q9BTM9 101 aaKnown RBP7.48□□□□□ -1.21
VPS50-208ENST00000458707 OR51B6Q9H340 312 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 C1orf123Q9NWV4 160 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 MED29Q9NX70 200 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 COPS7AQ9UBW8 275 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 LHFPL6Q9Y693 200 aa7.48□□□□□ -1.21
VPS50-208ENST00000458707 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 RRP8O43159 456 aaKnown RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 DEDDO75618 318 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 IGHV2-5P01817 119 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR8U9P0C7N5 309 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 DRD1P21728 446 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 CPT2P23786 658 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms