RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 TNFRSF13BO14836 293 aaPredicted RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 LIPFP07098 398 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 ZNF20P17024 532 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 GLRA1P23415 457 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 KIR3DL2P43630 455 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 TGM4P49221 684 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 FUT6P51993 359 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 SEC61A1P61619 476 aaKnown RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 CNN3Q15417 329 aaKnown RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 SMN1Q16637 294 aaKnown RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 WDR25Q64LD2 544 aaPredicted RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 HAGHLQ6PII5 290 aaPredicted RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 LYPD2Q6UXB3 125 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 IL17RELQ6ZVW7 336 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 FAM90A1Q86YD7 464 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 RAB40AQ8WXH6 277 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 AQP3Q92482 292 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 TMEM80Q96HE8 168 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 MED30Q96HR3 178 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
CD28-203ENST00000458610 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
CD28-203ENST00000458610 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 PQLC2LA1A4F0 135 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 KIAA1324LA8MWY0 1029 aaPredicted RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 TRAPPC2LH3BP13 241 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 GPR37O15354 613 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 ECDO95905 644 aaPredicted RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 GYPAP02724 150 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 OCM2P0CE71 109 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 OCMP0CE72 109 aaPredicted RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 EGR1P18146 543 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 PRKACBP22694 351 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 HAAOP46952 286 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 CCDC58Q4VC31 144 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 ATPAF1Q5TC12 328 aaPredicted RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 RDH10Q8IZV5 341 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 OR5AK2Q8NH90 309 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 TMPRSS13Q9BYE2 586 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 CHST5Q9GZS9 411 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 ISG20L2Q9H9L3 353 aaKnown RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 MMP26Q9NRE1 261 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
CD28-203ENST00000458610 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
CD28-203ENST00000458610 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 KIR2DS1A0A191URI9 304 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 A6NIN4 97 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 NKX6-3A6NJ46 265 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 J3QT63 122 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 TMPRSS2O15393 492 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 AKR7A2O43488 359 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 NDUFB3O43676 98 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 ACAA1P09110 424 aaPredicted RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 LIMS3P0CW19 117 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 LIMS4P0CW20 117 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 PIPP12273 146 aaPredicted RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 NANOS3P60323 173 aaKnown RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 RPL22L1Q6P5R6 122 aaKnown RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 ZNF841Q6ZN19 808 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 UTS2BQ765I0 119 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 C1QL2Q7Z5L3 287 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 DNAAF1Q8NEP3 725 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 RNF166Q96A37 237 aaPredicted RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 ZNF649Q9BS31 505 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 PKIBQ9C010 78 aa13.46□□□□□ -0.25
CD28-203ENST00000458610 FGF23Q9GZV9 251 aaPredicted RBP13.46□□□□□ -0.25
CD28-203ENST00000458610 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
CD28-203ENST00000458610 IGHV2-70DA0A0C4DH43 119 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 TRBV2A0A0J9YWF9 115 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 H3BSH0 61 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 ENSAO43768 121 aaKnown RBP13.45□□□□□ -0.26
CD28-203ENST00000458610 NOS1APO75052 506 aaPredicted RBP13.45□□□□□ -0.26
CD28-203ENST00000458610 PPIAL4GP0DN37 164 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 HSPA13P48723 471 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 ATP1B3P54709 279 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 PAX8Q06710 450 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 ST3GAL4Q11206 333 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 UBE2V2Q15819 145 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 LRRC10Q5BKY1 277 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 PNLDC1Q8NA58 520 aaKnown RBP13.45□□□□□ -0.26
CD28-203ENST00000458610 POC1AQ8NBT0 407 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 OR13C3Q8NGS6 347 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 GGHQ92820 318 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 FGGYQ96C11 551 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 CCL13Q99616 98 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 NUDT16L1Q9BRJ7 211 aaKnown RBP13.45□□□□□ -0.26
CD28-203ENST00000458610 BABAM2Q9NXR7 383 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 NLKQ9UBE8 527 aa13.45□□□□□ -0.26
CD28-203ENST00000458610 OR2AT4A6NND4 320 aa13.44□□□□□ -0.26
CD28-203ENST00000458610 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.44□□□□□ -0.26
CD28-203ENST00000458610 DVL1O14640 695 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms