RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TRIM64BA6NI03 449 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MAGEB3O15480 346 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 NDUFS7O75251 213 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 OCMP0CE72 109 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-204ENST00000452182 DAOP14920 347 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 GADD45AP24522 165 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MPZP25189 248 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 BDKRB2P30411 391 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 CFHR2P36980 270 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 ATP1B3P54709 279 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 DMRTC1Q5HYR2 192 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 GPR141Q7Z602 305 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 C11orf53Q8IXP5 236 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 NKAIN3Q8N8D7 197 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 OR51A2Q8NGJ7 313 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 FUNDC2Q9BWH2 189 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 PKIBQ9C010 78 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 SLITRK2Q9H156 845 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 OR51E2Q9H255 320 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 FN3KRPQ9HA64 309 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 TCF7L1Q9HCS4 588 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 SNTG1Q9NSN8 517 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 GSTK1Q9Y2Q3 226 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 DYSFO75923 2080 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 USF3Q68DE3 2245 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 IGKV1-27A0A075B6S5 117 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 FAM230AA0A1W2PPH8 454 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 J3QL48 77 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 RP2O75695 350 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 GRPP07492 148 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 HCKP08631 526 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 CD37P11049 281 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MTCP1P56278 107 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 KISS1Q15726 138 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MPPED2Q15777 294 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 HFEQ30201 348 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 PRAMEF6Q5VXH4 476 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 C22orf42Q6IC83 251 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 CRIP3Q6Q6R5 217 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 LRRTM1Q86UE6 522 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 LYPD6Q86Y78 171 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 TRMT10AQ8TBZ6 339 aaKnown RBP9.78□□□□□ -0.84
SCN9A-204ENST00000452182 NPRL2Q8WTW4 380 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 HPS1Q92902 700 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 PERPQ96FX8 193 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 CHCHD6Q9BRQ6 235 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 EXOSC4Q9NPD3 245 aaKnown RBP9.78□□□□□ -0.84
SCN9A-204ENST00000452182 J3QT63 122 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 CDIPTO14735 213 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 AIREO43918 545 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 ACAA1P09110 424 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-204ENST00000452182 CSF3P09919 207 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 PMELP40967 661 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 HAAOP46952 286 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 IL24Q13007 206 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 PRSS57Q6UWY2 283 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 DNM1P46Q6ZS02 220 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 ANKRD13BQ86YJ7 626 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 CALHM1Q8IU99 346 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 OR52N4Q8NGI2 321 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 OR10Z1Q8NGY1 313 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 AQP3Q92482 292 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 YIPF5Q969M3 257 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 FOXRED1Q96CU9 486 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-204ENST00000452182 KCTD7Q96MP8 289 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 FOXC2Q99958 501 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 METTL17Q9H7H0 456 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-204ENST00000452182 CHODLQ9H9P2 273 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 UFSP2Q9NUQ7 469 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 POLDIP2Q9Y2S7 368 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 POLQO75417 2590 aa9.77□□□□□ -0.85
SCN9A-204ENST00000452182 A6NLC8 198 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 LRRC30A6NM36 301 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 NDUFS8O00217 210 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 CDC14BO60729 498 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 NOS1APO75052 506 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 LY6HO94772 140 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 GABARAPO95166 117 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 FSTL3O95633 263 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 LHBP01229 141 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 MAS1P04201 325 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 ADRA2CP18825 462 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 MYL9P24844 172 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 COL8A2P25067 703 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 GIFP27352 417 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF93P35789 620 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 MTNR1BP49286 362 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PSMD7P51665 324 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 TMEM33P57088 247 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 DSCR9P59020 149 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PRR20EP86478 221 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PRR20CP86479 221 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PRR20DP86480 221 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PRR20BP86481 221 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 PRR20AP86496 221 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 DDI2Q5TDH0 399 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms