RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FCGR2CP31995 323 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SMCO1Q147U7 214 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 NKAIN1Q4KMZ8 207 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 DHRS11Q6UWP2 260 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SULF2Q8IWU5 870 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SLC38A9Q8NBW4 561 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 C10orf35Q96D05 121 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 KIRREL1Q96J84 757 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 PRRX2Q99811 253 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF160Q9HCG1 818 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 FBXL17Q9UF56 701 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 VCANP13611 3396 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 IGKV1D-8A0A087WSZ0 117 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 CD80P33681 288 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 KCNJ3P48549 501 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 MEOX2P50222 304 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 FAM69BQ5VUD6 431 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 FOXRED2Q8IWF2 684 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 C15orf54Q8N8G6 183 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 UBAC2Q8NBM4 344 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 GJC3Q8NFK1 279 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 NPRL2Q8WTW4 380 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 SFT2D1Q8WV19 159 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 S100A13Q99584 98 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF2Q9BSG1 426 aaPredicted RBP16.72■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
SDCBP-204ENST00000447182 MCTS1Q9ULC4 181 aaKnown RBP16.72■□□□□ 0.27
SDCBP-204ENST00000447182 AMDHD2Q9Y303 409 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 TIMM10BQ9Y5J6 103 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 C9JQL5 133 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 ZFAND5O76080 213 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 FCGR2AP12318 317 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 MSR1P21757 451 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 EIF1P41567 113 aaKnown RBP16.72■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF133P52736 654 aaPredicted RBP16.72■□□□□ 0.27
SDCBP-204ENST00000447182 TMEM33P57088 247 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 HMGN3Q15651 99 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 DMRTC1Q5HYR2 192 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 Q6ZRG5 221 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 CCDC54Q8NEL0 328 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 LMAN1LQ9HAT1 526 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 PLEKHA2Q9HB19 425 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 CACFD1Q9UGQ2 172 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 ATPIF1Q9UII2 106 aa16.72■□□□□ 0.27
SDCBP-204ENST00000447182 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 IFNA21P01568 189 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 APOC1P02654 83 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 SLC35A1P78382 337 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 C10orf128Q5T292 105 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 FADS6Q8N9I5 356 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 ARV1Q9H2C2 271 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 NELFAQ9H3P2 528 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 EDARQ9UNE0 448 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 KPTNQ9Y664 436 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 MYO7BQ6PIF6 2116 aa16.71■□□□□ 0.27
SDCBP-204ENST00000447182 TOX3O15405 576 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 OR2J2O76002 312 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 FAHP16930 419 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 OTX1P32242 354 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 SFTPDP35247 375 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 HIST1H3AP68431 136 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 TMEM176BQ3YBM2 270 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 HIST2H3PS2Q5TEC6 136 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 GGNBP1Q5YKI7 109 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 FOXL2NBQ6ZUU3 175 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 HIST2H3AQ71DI3 136 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 GALNTL5Q7Z4T8 443 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 C6orf201Q7Z4U5 140 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 CPEB2Q7Z5Q1 589 aaKnown RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 SLC25A45Q8N413 288 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 KDF1Q8NAX2 398 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 OR9K2Q8NGE7 335 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 SLC22A8Q8TCC7 542 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 C2CD4CQ8TF44 421 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 Q96M66 194 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 STARD10Q9Y365 291 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 DKK1O94907 266 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 KLK2P20151 261 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 GUCA1AP43080 201 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 CLDN17P56750 224 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 ENDOGQ14249 297 aaKnown RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 COMMD1Q8N668 190 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 USB1Q9BQ65 265 aaKnown RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 FBXO9Q9UK97 447 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-204ENST00000447182 PADI1Q9ULC6 663 aa16.7■□□□□ 0.26
SDCBP-204ENST00000447182 AGPAT2O15120 278 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 OR8U9P0C7N5 309 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 MYF5P13349 255 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 RAB5BP61020 215 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 SWI5Q1ZZU3 235 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 RSPO1Q2MKA7 263 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 RPUSD3Q6P087 351 aaKnown RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 DTX1Q86Y01 620 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 WDSUB1Q8N9V3 476 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 OR8U1Q8NH10 309 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 MRPL24Q96A35 216 aaKnown RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 FAM212BQ9NTI7 297 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 ANXA10Q9UJ72 324 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 PIGLQ9Y2B2 252 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms