RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PNLIPP16233 465 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 ZNF14P17017 642 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 RBMXP38159 391 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SULT1A2P50226 295 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 MIDNQ504T8 468 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 CDCA3Q99618 268 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 URM1Q9BTM9 101 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 FAAP24Q9BTP7 215 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 RAB33BQ9H082 229 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SHANK1Q9Y566 2161 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 TSPAN15O95858 294 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PGA4P0DJD7 388 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PGA3P0DJD8 388 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 NAT2P11245 290 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 ZNF41P51814 821 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 DVL1P1P54792 670 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 ZP4Q12836 540 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 TAF9Q16594 264 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PHLDA2Q53GA4 152 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 C5orf24Q7Z6I8 188 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PECRQ9BY49 303 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SH3BGRL3Q9H299 93 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 TRBV23-1A0A0A0MS06 115 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 A0A1B0GX78 115 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SPRY1O43609 319 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 OR2J2O76002 312 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 IGHG1P01857 330 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 LYL1P12980 280 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 ITGA3P26006 1051 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 GSK3AP49840 483 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 ECH1Q13011 328 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 CRIP3Q6Q6R5 217 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PEG10Q86TG7 708 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 LHFPL1Q86WI0 220 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 CNTNAP3Q9BZ76 1288 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 PLEKHJ1Q9NW61 149 aa12.48□□□□□ -0.41
ERCC3-203ENST00000445889 NXT1Q9UKK6 140 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 C14orf166Q9Y224 244 aaKnown RBP12.48□□□□□ -0.41
ERCC3-203ENST00000445889 URB1O60287 2271 aaKnown RBP12.47□□□□□ -0.41
ERCC3-203ENST00000445889 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CST4P01036 141 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 NQO2P16083 231 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 ZNF43P17038 809 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CLDN17P56750 224 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 HGFACQ04756 655 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 HSD17B11Q8NBQ5 300 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 TSTD1Q8NFU3 115 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 OR9K2Q8NGE7 335 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 OR2AE1Q8NHA4 323 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 OIT3Q8WWZ8 545 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 S100A13Q99584 98 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 B3GALT1Q9Y5Z6 326 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 C5orf52A6NGY3 159 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 FAM157AC9JC47 383 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 TRAF3IP2O43734 574 aaPredicted RBP12.47□□□□□ -0.41
ERCC3-203ENST00000445889 GDF9O60383 454 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 IFNA2P01563 188 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 LTBRP36941 435 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CEBPGP53567 150 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 S100A12P80511 92 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 IL15RAQ13261 267 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 NOXO1Q8NFA2 376 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 CD300LFQ8TDQ1 290 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 ST8SIA1Q92185 356 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 GPHA2Q96T91 129 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.41
ERCC3-203ENST00000445889 SDHAF3Q9NRP4 125 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 DNAJB11Q9UBS4 358 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 GHRLQ9UBU3 117 aa12.47□□□□□ -0.41
ERCC3-203ENST00000445889 MSTNO14793 375 aa12.46□□□□□ -0.41
ERCC3-203ENST00000445889 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
ERCC3-203ENST00000445889 EIF5AP63241 154 aaKnown RBP12.46□□□□□ -0.41
ERCC3-203ENST00000445889 ACTBL2Q562R1 376 aa12.46□□□□□ -0.41
ERCC3-203ENST00000445889 SULF2Q8IWU5 870 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms