RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TSEN15Q8WW01 171 aaKnown RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 GATAD2BQ8WXI9 593 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 RPL3LQ92901 407 aaKnown RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 TMEM186Q96B77 213 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 FGGYQ96C11 551 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 C12orf43Q96C57 262 aaKnown RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 SMIM19Q96E16 107 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 CNBD2Q96M20 576 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 OR8B2Q96RD0 313 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 ZNF184Q99676 751 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 MND1Q9BWT6 205 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 OR51I2Q9H344 312 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 ERVK-18Q9QC07 812 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 CLEC2DQ9UHP7 191 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 CDC42EP3Q9UKI2 254 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 BLOC1S6Q9UL45 172 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 DHDHQ9UQ10 334 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 POLDIP2Q9Y2S7 368 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 PCDHGB5Q9Y5G0 923 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 MTORP42345 2549 aa9.08□□□□□ -0.96
HDAC6-211ENST00000443563 SETD2Q9BYW2 2564 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-211ENST00000443563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.08□□□□□ -0.969e-8■■■□□ 18
HDAC6-211ENST00000443563 TLN2Q9Y4G6 2542 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 ABCA1O95477 2261 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 PQLC2LA1A4F0 135 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 INAFM1C9JVW0 142 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 E9PI62 339 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 J3QT63 122 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 OGG1O15527 345 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 PLPP2O43688 288 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 ZFPL1O95159 310 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 CD2P06729 351 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 WNT2P09544 360 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 PRKACBP22694 351 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 CD80P33681 288 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 HAAOP46952 286 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 RBP2P50120 134 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 ATP1B3P54709 279 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 GNB2P62879 340 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 UBE2V2Q15819 145 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 SFRP4Q6FHJ7 346 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-211ENST00000443563 HAGHLQ6PII5 290 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-211ENST00000443563 SERPINA12Q8IW75 414 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 DNAAF1Q8NEP3 725 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 DEFB108BQ8NET1 73 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 OR5D14Q8NGL3 314 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 RPS4Y2Q8TD47 263 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 GPR148Q8TDV2 347 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 AQP3Q92482 292 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 SPSB1Q96BD6 273 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 BORCS8Q96FH0 119 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 PDCD1LG2Q9BQ51 273 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 PKIBQ9C010 78 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 FGF23Q9GZV9 251 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-211ENST00000443563 SHARPINQ9H0F6 387 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 LPAR2Q9HBW0 351 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 RASL12Q9NYN1 266 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 DNAJB11Q9UBS4 358 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 ZNF281Q9Y2X9 895 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 HIVEP2P31629 2446 aa9.07□□□□□ -0.96
HDAC6-211ENST00000443563 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 ZFHX3Q15911 3703 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 PPIAL4CA0A0B4J2A2 164 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 A0A0G2JMP0 313 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 A0A0X1KG70 313 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 FAM230AA0A1W2PPH8 454 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 A8MXK9 166 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 J3QLI3 93 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 RGS10O43665 173 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 CYB5AP00167 134 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 MT-ND2P03891 347 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 ACAA1P09110 424 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 ATF1P18846 271 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 GLRA1P23415 457 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 C21orf33P30042 268 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 PITPNBP48739 271 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 GTF2A1P52655 376 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 RIPPLY3P57055 190 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 SLC35A2P78381 396 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 BDH1Q02338 343 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 HNRNPA0Q13151 305 aaKnown RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 C11orf91Q3C1V1 193 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 FAM201AQ5SY85 155 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 LHFPL2Q6ZUX7 228 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 SLC36A1Q7Z2H8 476 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 PARP16Q8N5Y8 322 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 ZNF485Q8NCK3 441 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 OR4M2Q8NGB6 313 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 OR51A4Q8NGJ6 313 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 THRSPQ92748 146 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 TMIGD2Q96BF3 282 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 ADAT3Q96EY9 351 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 CPNE2Q96FN4 548 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 SSBP3Q9BWW4 388 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 CDCA4Q9BXL8 241 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 DNTTIP1Q9H147 329 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms