RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GZMBP10144 247 aa14.05□□□□□ -0.16
DHFR-201ENST00000439211 LINC00346Q8IVM7 164 aa14.05□□□□□ -0.16
DHFR-201ENST00000439211 ADAM19Q9H013 955 aa14.05□□□□□ -0.16
DHFR-201ENST00000439211 MMP25Q9NPA2 562 aa14.05□□□□□ -0.16
DHFR-201ENST00000439211 MPDZO75970 2070 aa14.05□□□□□ -0.16
DHFR-201ENST00000439211 A0A1W2PPQ1 181 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 A0A1W2PQF6 199 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 TNFSF14O43557 240 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 OPN1LWP04000 364 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 CSTBP04080 98 aaKnown RBP14.04□□□□□ -0.16
DHFR-201ENST00000439211 CT45A8P0DMV1 189 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 CT45A9P0DMV2 189 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 MSX1P28360 303 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 TMEM33P57088 247 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 ERVFC1-1P60608 527 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 SHHQ15465 462 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 CT45A2Q5DJT8 189 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 KLHL24Q6TFL4 600 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 BTNL3Q6UXE8 466 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 GPER1Q99527 375 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 TFPI2P48307 235 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 ARRB1P49407 418 aaPredicted RBP14.04□□□□□ -0.16
DHFR-201ENST00000439211 PMPCAQ10713 525 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 PNLIPRP3Q17RR3 467 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 NUP54Q7Z3B4 507 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 FJX1Q86VR8 437 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 FNDC9Q8TBE3 224 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 SCGB3A2Q96PL1 93 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 ZNF587Q96SQ5 575 aaPredicted RBP14.04□□□□□ -0.16
DHFR-201ENST00000439211 MYOZ1Q9NP98 299 aaPredicted RBP14.04□□□□□ -0.16
DHFR-201ENST00000439211 RNF24Q9Y225 148 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 EMC9Q9Y3B6 208 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 FLVCR1Q9Y5Y0 555 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 KIAA1671Q9BY89 1806 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 ASXL3Q9C0F0 2248 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 LOC102724200A0A096LPH7 203 aaPredicted RBP14.04□□□□□ -0.16
DHFR-201ENST00000439211 PRSS47A8MTI9 375 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 H0YIZ8 118 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 YPEL5P62699 121 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 LFNGQ8NES3 379 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 TSLPQ969D9 159 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 OR5B12Q96R08 314 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 NMES1Q9C002 83 aa14.04□□□□□ -0.16
DHFR-201ENST00000439211 HEATR5AQ86XA9 2040 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 CDRT15L2A8MXV6 281 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 NPIPA5E9PKD4 350 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 LEMD1Q68G75 181 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
DHFR-201ENST00000439211 OR13C8Q8NGS7 320 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 OR4K15Q8NH41 348 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 MUCL1Q96DR8 90 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 C2orf50Q96LR7 162 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 DCBLD2Q96PD2 775 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 RNF126Q9BV68 326 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 C1orf198Q9H425 327 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 NPIPA1Q9UND3 350 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 IL33O95760 270 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 RAB11AP62491 216 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 SSBP1Q04837 148 aaKnown RBP14.03□□□□□ -0.16
DHFR-201ENST00000439211 WDR38Q5JTN6 314 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 CLEC2AQ6UVW9 174 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 ZNF100Q8IYN0 542 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 BHLHE23Q8NDY6 225 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 WFIKKN1Q96NZ8 548 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 HS3ST3B1Q9Y662 390 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 PGCP20142 388 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 MPZP25189 248 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 DEFB133Q30KQ1 61 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 ABLIM2Q6H8Q1 611 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 MED12Q93074 2177 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 RARRES2Q99969 163 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 VDAC3Q9Y277 283 aa14.03□□□□□ -0.16
DHFR-201ENST00000439211 WDR87Q6ZQQ6 2873 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 C17orf51A8MQB3 221 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 PRR32B1ATL7 298 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 NSA2O95478 260 aaKnown RBP14.02□□□□□ -0.16
DHFR-201ENST00000439211 GCGP01275 180 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 ACKR1Q16570 336 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 ZNF321PQ8N8H1 164 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 TAS2R4Q9NYW5 299 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 LAMP3Q9UQV4 416 aa14.02□□□□□ -0.16
DHFR-201ENST00000439211 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 H3BML4 177 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 TNFSF12O43508 249 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 H2BFMP0C1H6 154 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 GFERP55789 205 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 ZNF141Q15928 474 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 APCDD1LQ8NCL9 501 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 ELSPBP1Q96BH3 223 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 CTHRC1Q96CG8 243 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.17
DHFR-201ENST00000439211 YBX2Q9Y2T7 364 aaKnown RBP14.02□□□□□ -0.17
DHFR-201ENST00000439211 ZNF41P51814 821 aaPredicted RBP14.02□□□□□ -0.17
DHFR-201ENST00000439211 RPL23AP62750 156 aaKnown RBP14.02□□□□□ -0.17
DHFR-201ENST00000439211 ELOBQ15370 118 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 TOMM20LQ6UXN7 152 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 FKBP11Q9NYL4 201 aa14.02□□□□□ -0.17
DHFR-201ENST00000439211 SEMA5BQ9P283 1151 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms