RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 A0A0J9YY10 115 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 CLDN4O14493 209 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 GEMIN2O14893 280 aaKnown RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 DEDDO75618 318 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 ONECUT2O95948 504 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 CLPSP04118 112 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 HEXBP07686 556 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 IL12BP29460 328 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 CRABP1P29762 137 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 SLC37A1P57057 533 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 UBE2KP61086 200 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 COL19A1Q14993 1142 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 OR2T2Q6IF00 324 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 KLHL24Q6TFL4 600 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 OOSP2Q86WS3 158 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 C11orf40Q8WZ69 217 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 C5orf34Q96MH7 638 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 MAGT1Q9H0U3 335 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 LIME1Q9H400 295 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 HSF4Q9ULV5 492 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 MAFFQ9ULX9 164 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 C14orf166Q9Y224 244 aaKnown RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 FAM186AA6NE01 2351 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 A8MVM7 634 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 TMEM14DPA8MWL7 114 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 E9PLN8 166 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 BPNT1O95861 308 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 COL9A1P20849 921 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 DDTP30046 118 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 APOBEC1P41238 236 aaKnown RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 IL15RAQ13261 267 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 RUNX3Q13761 415 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 SSX2Q16385 188 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 NKAIN1Q4KMZ8 207 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 MEX3BQ6ZN04 569 aaKnown RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 TMEM217Q8N7C4 229 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF610Q8N9Z0 462 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 DTWD2Q8NBA8 298 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 HOXB13Q92826 284 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-204ENST00000438964 PMM1Q92871 262 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 ZDHHC12Q96GR4 267 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 DNAJB11Q9UBS4 358 aa11.79□□□□□ -0.52
ACTN1-204ENST00000438964 NPIPA5E9PKD4 350 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 RER1O15258 196 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 F10P00742 488 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 HPNP05981 417 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 GP1BBP13224 206 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 RUNX1Q01196 453 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 OGFOD3Q6PK18 319 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 Q7L0L9 218 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 SULF2Q8IWU5 870 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 OR11L1Q8NGX0 322 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PIGTQ969N2 578 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 WDR92Q96MX6 357 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 NPIPA1Q9UND3 350 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PLPP3O14495 311 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PPP1R2P9O14990 202 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 DANCRP0C864 163 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 HSD11B1P28845 292 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 RBP2P50120 134 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 DLK1P80370 383 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 SGCBQ16585 318 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 FAM57BQ71RH2 274 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 DTX1Q86Y01 620 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF440Q8IYI8 595 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 MUCL1Q96DR8 90 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 WFIKKN1Q96NZ8 548 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 MCTS1Q9ULC4 181 aaKnown RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 DMDP11532 3685 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 IGHV3-20A0A0C4DH32 117 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 STMND1H3BQB6 276 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 OR5AC1P0C628 307 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 LYL1P12980 280 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PAX6P26367 422 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 CHATP28329 748 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 OR5AS1Q8N127 324 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 TMEM123Q8N131 208 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 SPPL3Q8TCT6 385 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 PTPMT1Q8WUK0 201 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 THRSPQ92748 146 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 FRZBQ92765 325 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 TCTN2Q96GX1 697 aa11.78□□□□□ -0.52
ACTN1-204ENST00000438964 C1orf147Q96MC9 270 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-204ENST00000438964 OSGIN2Q9Y236 505 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms