RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 FOXK1P85037 733 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 POU3F1Q03052 451 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 DPPA2Q7Z7J5 298 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF429Q86V71 674 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 RSC1A1Q92681 617 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 GALNT14Q96FL9 552 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 PACRGQ96M98 296 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 OR10A2Q9H208 303 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 CA14Q9ULX7 337 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 CYP8B1Q9UNU6 501 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 SLCO1B1Q9Y6L6 691 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 MYO15AQ9UKN7 3530 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 IGKV1D-8A0A087WSZ0 117 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 SMCO3A2RU48 225 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 E5RGE8 158 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 AHSA1O95433 338 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 ADH1BP00325 375 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 GABRR1P24046 479 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 CTNNB1P35222 781 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 APOBEC1P41238 236 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 C21orf62-AS1Q17RA5 79 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 PHLDA2Q53GA4 152 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 HIST3H2BBQ8N257 126 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 OR10AD1Q8NGE0 317 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 OR2G3Q8NGZ4 309 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 SNX22Q96L94 193 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 C5orf34Q96MH7 638 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 CCNL2Q96S94 520 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 HDHD3Q9BSH5 251 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 PLEKHA2Q9HB19 425 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 NSG2Q9Y328 171 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 TNFSF12O43508 249 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 OPN1LWP04000 364 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 FCARP24071 287 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 FNDC7Q5VTL7 733 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 OGFOD3Q6PK18 319 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 FRZBQ92765 325 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 TOX2Q96NM4 488 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 SRPK3Q9UPE1 567 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM184BQ9Y519 407 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 F5P12259 2224 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 PLPP3O14495 311 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 P2RY1P47900 373 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 PIGPP57054 158 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 TAS2R46P59540 309 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 PRTGQ2VWP7 1150 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM180AQ6UWF9 173 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 FBXW12Q6X9E4 464 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 WDFY1Q8IWB7 410 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 KDF1Q8NAX2 398 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 SUMF1Q8NBK3 374 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 FAM206AQ9NX38 181 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF724A8MTY0 619 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 SLC26A5P58743 744 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 RND3P61587 244 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 C1orf61Q13536 156 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 OR8G1Q15617 311 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF776Q68DI1 518 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 C6orf201Q7Z4U5 140 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 C1QL2Q7Z5L3 287 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 LHFPL1Q86WI0 220 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 C11orf40Q8WZ69 217 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 WDR92Q96MX6 357 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 GPR84Q9NQS5 396 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 NXT1Q9UKK6 140 aaKnown RBP10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 PADI1Q9ULC6 663 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 KCNIP3Q9Y2W7 256 aa10.18□□□□□ -0.78
HMGCS1-202ENST00000433297 GEMIN2O14893 280 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 SCAF4O95104 1147 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5AC1P0C628 307 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 OPRM1P35372 400 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 MMP16P51512 607 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 RRADP55042 308 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 SLC37A1P57057 533 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 FUT7Q11130 342 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 OR52M1Q8NGK5 317 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 VN1R1Q9GZP7 353 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 SPAG17Q6Q759 2223 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF850A8MQ14 1090 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 IL33O95760 270 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 PGA4P0DJD7 388 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 PGA5P0DJD9 388 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM225BP0DP42 221 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 PGCP20142 388 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 IL2RGP31785 369 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5L1Q8NGL2 311 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 DHRS7CA6NNS2 312 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 IFNA10P01566 189 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 CDAP32320 146 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 CARD17Q5XLA6 110 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 HLA-DQA1Q5Y7H0 255 aa10.17□□□□□ -0.78
HMGCS1-202ENST00000433297 MEX3BQ6ZN04 569 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms