RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 PLCXD3Q63HM9 321 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 ZNF773Q6PK81 442 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 WDR82Q6UXN9 313 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 UNQ9370/PRO34162Q6UXP9 181 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 SCCPDHQ8NBX0 429 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 OR13C3Q8NGS6 347 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 GPR148Q8TDV2 347 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 PP6455Q8WZ26 134 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 RPL3LQ92901 407 aaKnown RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 C1orf159Q96HA4 380 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 PIMREGQ9BSJ6 248 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 COMMD4Q9H0A8 199 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 C1orf123Q9NWV4 160 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
USP40-205ENST00000430158 NPTNQ9Y639 398 aa10.43□□□□□ -0.74
USP40-205ENST00000430158 LRP5LA4QPB2 252 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 TRIM64CA6NLI5 447 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 CLDN25C9JDP6 229 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 CDIPTO14735 213 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 PPIHO43447 177 aaKnown RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 GPX5O75715 221 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 SC5DO75845 299 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 CYB5R3P00387 301 aaPredicted RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 GRPP07492 148 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 CPEP16870 476 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 IGFBP3P17936 291 aaPredicted RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 EGR1P18146 543 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 ATF1P18846 271 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 USF1P22415 310 aaPredicted RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 EEF1B2P24534 225 aaKnown RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 MLLT11Q13015 90 aaPredicted RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 MED22Q15528 200 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 YIF1BQ5BJH7 314 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 UBE2UQ5VVX9 321 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 MAPK1IP1LQ8NDC0 245 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 DNAAF1Q8NEP3 725 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 OR10Z1Q8NGY1 313 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 AQP3Q92482 292 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 TECTBQ96PL2 329 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 MGLLQ99685 303 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 CCDC90BQ9GZT6 254 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 METTL17Q9H7H0 456 aaPredicted RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 RNF7Q9UBF6 113 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
USP40-205ENST00000430158 ANK3Q12955 4377 aaKnown RBP10.42□□□□□ -0.74
USP40-205ENST00000430158 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
USP40-205ENST00000430158 PNMA8CA0A1B0GUJ8 204 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 SRRM5B3KS81 715 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 RHBDL1O75783 438 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 GATBO75879 557 aaKnown RBP10.41□□□□□ -0.74
USP40-205ENST00000430158 FOSL1P15407 271 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 IL2RGP31785 369 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 SOX2P48431 317 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 CHN2P52757 468 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 INSL4Q14641 139 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 SSX1Q16384 188 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 Q499Y3 187 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 ZNF367Q7RTV3 350 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 CALHM1Q8IU99 346 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 PHC2Q8IXK0 858 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 CLDND2Q8NHS1 167 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 ORAI1Q96D31 301 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 DERL3Q96Q80 235 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 HIST1H2AAQ96QV6 131 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 ZCCHC4Q9H5U6 513 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 ZNF696Q9H7X3 374 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 PLEKHA1Q9HB21 404 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 DHDHQ9UQ10 334 aa10.41□□□□□ -0.74
USP40-205ENST00000430158 ZNF879B4DU55 563 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 NOS1APO75052 506 aaPredicted RBP10.4□□□□□ -0.74
USP40-205ENST00000430158 ZNF205O95201 554 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 ACAA1P09110 424 aaPredicted RBP10.4□□□□□ -0.74
USP40-205ENST00000430158 CD99P14209 185 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 ZNF20P17024 532 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 FUT6P51993 359 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 ERVK11-1P61568 191 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 BTG1P62324 171 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 TMEM155Q4W5P6 130 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 LIPKQ5VXJ0 399 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 TMEM91Q6ZNR0 172 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 ANGPTL5Q86XS5 388 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 LYPD6Q86Y78 171 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 SERPINA12Q8IW75 414 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 OR51A2Q8NGJ7 313 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 OR13C9Q8NGT0 318 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 RAB1CQ92928 201 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 TMEM106AQ96A25 262 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 C18orf12Q96KH6 178 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 PPIL3Q9H2H8 161 aaKnown RBP10.4□□□□□ -0.74
USP40-205ENST00000430158 TAS2R4Q9NYW5 299 aa10.4□□□□□ -0.74
USP40-205ENST00000430158 NAV3Q8IVL0 2385 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 TRAV8-7A0A075B6U6 113 aa10.39□□□□□ -0.75
USP40-205ENST00000430158 A6NLC8 198 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms