RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 RNF138Q8WVD3 245 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 CMTM5Q96DZ9 223 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 BTN2A3PQ96KV6 586 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 VAT1Q99536 393 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 HDHD3Q9BSH5 251 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 SLC25A2Q9BXI2 301 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 SAMD10Q9BYL1 202 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 DERL2Q9GZP9 239 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 COA1Q9GZY4 146 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 DSN1Q9H410 356 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 PRORYQ9H606 182 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 WFDC1Q9HC57 220 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 RRAGDQ9NQL2 400 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 CD84Q9UIB8 345 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 VAX2Q9UIW0 290 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 C3orf18Q9UK00 162 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 ZNF225Q9UK10 706 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 RAB23Q9ULC3 237 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 PDS5BQ9NTI5 1447 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 KIAA0232Q92628 1395 aa1.98□□□□□ -2.09
HMGB1P9-201ENST00000429856 MAP3K15Q6ZN16 1313 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 C9J4A7 227 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 FTCDNL1E5RQL4 147 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 LINC01619G3V211 115 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 TNFRSF11BO00300 401 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 SLC31A1O15431 190 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 GABARAPO95166 117 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 OR5F1O95221 314 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 ATP6V1G2O95670 118 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 IGHV4-34P06331 123 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 TLX1NBP0CAT3 122 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 OCM2P0CE71 109 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 MLNP12872 115 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 ZNF35P13682 527 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 CCNE1P24864 410 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 PAX6P26367 422 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 GTF2H1P32780 548 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 NUDT1P36639 197 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 POLR2IP36954 125 aaKnown RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 NMUP48645 174 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 CCR6P51684 374 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 STC1P52823 247 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 CDKN2DP55273 166 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 MAGOHP61326 146 aaKnown RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 RPL10AP62906 217 aaKnown RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 IL5RAQ01344 420 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 C2orf54Q08AI8 447 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 STX5Q13190 355 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 TRIP13Q15645 432 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 COX19Q49B96 90 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 C2orf83Q53S99 150 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 HES5Q5TA89 166 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 OTPQ5XKR4 325 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 BLIDQ8IZY5 108 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 GAPTQ8N292 157 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 ZNF786Q8N393 782 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 OR5L1Q8NGL2 311 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 PHOSPHO2Q8TCD6 241 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 RNF133Q8WVZ7 376 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 ZMYND19Q96E35 227 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 SEH1LQ96EE3 360 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 IMMP1LQ96LU5 166 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 TMEM56Q96MV1 263 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 HBEGFQ99075 208 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 GPR22Q99680 433 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 NEU3Q9UQ49 428 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 SIGLEC9Q9Y336 463 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 POLR3HQ9Y535 204 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 LRRC42Q9Y546 428 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 USH1CQ9Y6N9 552 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 MAP3K5Q99683 1374 aa1.97□□□□□ -2.09
HMGB1P9-201ENST00000429856 MN1Q10571 1320 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 ANKRD12Q6UB98 2062 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 DOCK8Q8NF50 2099 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 IGHV3-74A0A0B4J1X5 117 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 TRAV8-4A0A0B4J246 113 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 IGHV3OR16-9A0A0B4J2B5 98 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 IGHV1-69DA0A0B4J2H0 117 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 OR6C70A6NIJ9 312 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 C11orf94C9JXX5 98 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 H0Y980 276 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 FABP7O15540 132 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 SULT1B1O43704 296 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 HPGDSO60760 199 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 RP2O75695 350 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 LYPLA2O95372 231 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 IFNA5P01569 189 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 P01737 135 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 CTSLP07711 333 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 CTXN2P0C2S0 81 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 SLC35G6P0C7Q6 338 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 ZDHHC11BP0C7U3 371 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 PVALBP20472 110 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 MYL9P24844 172 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 GRPRP30550 384 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 RPA3P35244 121 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 CYB561P49447 251 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 LHX2P50458 406 aa1.96□□□□□ -2.1
HMGB1P9-201ENST00000429856 P2RX1P51575 399 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms