RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TREM1Q9NP99 234 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 MYEF2Q9P2K5 600 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 NOP16Q9Y3C1 178 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 BDP1A6H8Y1 2624 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 TRAV8-7A0A075B6U6 113 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 RNF222A6NCQ9 220 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 MASP2O00187 686 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 EFSO43281 561 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 SS18L1O75177 396 aaPredicted RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 CTAG2O75638 210 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 FARS2O95363 451 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 PTGFRP43088 359 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 GSK3AP49840 483 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 SNRPEP62304 92 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 TGIF1Q15583 401 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 TSC22D1Q15714 1073 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 ODF4Q2M2E3 257 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 ANKRD16Q6P6B7 361 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 Q6ZS92 163 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 WDFY1Q8IWB7 410 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 ZNF100Q8IYN0 542 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 OR10S1Q8NGN2 331 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 OR5M8Q8NGP6 311 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 PPP1R1CQ8WVI7 109 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 GMPPAQ96IJ6 420 aaPredicted RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 CNTNAP3BQ96NU0 1288 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 TMEM231Q9H6L2 316 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 GPR35Q9HC97 309 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 PLA2G3Q9NZ20 509 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 STEAP1Q9UHE8 339 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 WASF3Q9UPY6 502 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 PLEKHA6Q9Y2H5 1048 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 NOSIPQ9Y314 301 aaKnown RBP7.47□□□□□ -1.21
SH3D19-204ENST00000427414 TIMM10BQ9Y5J6 103 aa7.47□□□□□ -1.21
SH3D19-204ENST00000427414 A0A1B0GTH9 108 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 MEX3AA1L020 520 aaKnown RBP7.46□□□□□ -1.21
SH3D19-204ENST00000427414 OR6C6A6NF89 314 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 M0QYG6 137 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 SLC17A2O00624 439 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 MRPL33O75394 65 aaKnown RBP7.46□□□□□ -1.21
SH3D19-204ENST00000427414 RAB3DO95716 219 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 CRYABP02511 175 aaKnown RBP7.46□□□□□ -1.21
SH3D19-204ENST00000427414 SLC25A4P12235 298 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 RAB6AP20340 208 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 NFYBP25208 207 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 CD34P28906 385 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 OR2A2Q6IF42 318 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 GABRG1Q8N1C3 465 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 INO80EQ8NBZ0 244 aaPredicted RBP7.46□□□□□ -1.21
SH3D19-204ENST00000427414 OR1J2Q8NGS2 313 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 CPNE2Q96FN4 548 aaPredicted RBP7.46□□□□□ -1.21
SH3D19-204ENST00000427414 GAL3ST1Q99999 423 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 PBOV1Q9GZY1 135 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 OPA3Q9H6K4 179 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 GHRLQ9UBU3 117 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 POLR1DQ9Y2S0 133 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 SDK1Q7Z5N4 2213 aa7.46□□□□□ -1.21
SH3D19-204ENST00000427414 MPZL1O95297 269 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 PNPP00491 289 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 AMY2AP04746 511 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 CBR1P16152 277 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 CRYGSP22914 178 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 ARR3P36575 388 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 POU3F4P49335 361 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 ATP1B3P54709 279 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 DHRS2Q13268 280 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 PLEKHN1Q494U1 663 aaPredicted RBP7.46□□□□□ -1.22
SH3D19-204ENST00000427414 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.46□□□□□ -1.22
SH3D19-204ENST00000427414 ARL11Q969Q4 196 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 TMEM106AQ96A25 262 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 FOXB1Q99853 325 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 KCNK15Q9H427 330 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 SEC61A2Q9H9S3 476 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 GSN-AS1Q9NRJ2 163 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 V9GYS6 101 aa7.46□□□□□ -1.22
SH3D19-204ENST00000427414 ZNF705EA8MWA4 302 aaPredicted RBP7.45□□□□□ -1.22
SH3D19-204ENST00000427414 KCNAB3O43448 404 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 WNT11O96014 354 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 HLA-AP01891 365 aaKnown RBP7.45□□□□□ -1.22
SH3D19-204ENST00000427414 TTRP02766 147 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 TUBG1P23258 451 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 THBS4P35443 961 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 CCL11P51671 97 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 PRKXP51817 358 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 TAS2R19P59542 299 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 ACTBP60709 375 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 RAB5BP61020 215 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 ACTG1P63261 375 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 GUSBP1Q15486 140 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 SCGB2B2Q4G0G5 96 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 KRTCAP3Q53RY4 240 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 VASH2Q86V25 355 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 LYPD6Q86Y78 171 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 SLC22A24Q8N4F4 322 aa7.45□□□□□ -1.22
SH3D19-204ENST00000427414 ARL6IP6Q8N6S5 226 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms