RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 DDX28Q9NUL7 540 aaKnown RBP4.64□□□□□ -1.67
C9orf3-205ENST00000427193 CLN6Q9NWW5 311 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 POU2F3Q9UKI9 436 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 COPS3Q9UNS2 423 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 KLHDC2Q9Y2U9 406 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 LHFPL6Q9Y693 200 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 A3GALT2U3KPV4 340 aa4.64□□□□□ -1.67
C9orf3-205ENST00000427193 ARPC4-TTLL3A0A0A6YYG9 625 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 A0A1W2PQL4 384 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR6C6A6NF89 314 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SNTNA6NMZ2 147 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SELENOFO60613 162 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 FADS2O95864 444 aaKnown RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 RENP00797 406 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 IGLV1-44P01699 117 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CST2P09228 141 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR2T7P0C7T2 308 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 NPR2P20594 1047 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CRYGSP22914 178 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CDAP32320 146 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OPRL1P41146 370 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ALDH3B2P48448 385 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 NR1H2P55055 460 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CDH15P55291 814 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SH3BGRP55822 239 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ARF1P84077 181 aaKnown RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 EMX1Q04741 257 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 TBCEQ15813 527 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 GABRA6Q16445 453 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CEACAM16Q2WEN9 425 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CDONQ4KMG0 1287 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 PAPPA-AS1Q5QFB9 102 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SYT6Q5T7P8 510 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 UBE2UQ5VVX9 321 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 TMEM211Q6ICI0 200 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 KRT80Q6KB66 452 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 DNM1P34Q6PK57 102 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 DEGS2Q6QHC5 323 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 STAC2Q6ZMT1 411 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 C3P1Q6ZMU1 363 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 Q6ZSR3 168 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 NCCRP1Q6ZVX7 275 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CHMP1BQ7LBR1 199 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 KRT74Q7RTS7 529 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SSX6Q7RTT6 188 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SLC16A9Q7RTY1 509 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 DPY19L4Q7Z388 723 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 TBC1D26Q86UD7 250 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 NFE4Q86UQ8 179 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 SYS1Q8N2H4 156 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ZNF786Q8N393 782 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ACBD7Q8N6N7 88 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 WDR31Q8NA23 367 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 PROKR2Q8NFJ6 384 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 BPIFB6Q8NFQ5 453 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 DMBX1Q8NFW5 382 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR1K1Q8NGR3 316 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR6N1Q8NGY5 312 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR2T27Q8NH04 317 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 LILRB4Q8NHJ6 448 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 RAB40AQ8WXH6 277 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ZMYND19Q96E35 227 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 PLEKHA8Q96JA3 519 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ALKBH3Q96Q83 286 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 COPS4Q9BT78 406 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ZNF416Q9BWM5 594 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ULBP2Q9BZM5 246 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR10A4Q9H209 315 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 OR51V1Q9H2C8 321 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 PIGMQ9H3S5 423 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 LIME1Q9H400 295 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CCNB1IP1Q9NPC3 277 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 TAS2R16Q9NYV7 291 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ERVK-18Q9QC07 812 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CRNNQ9UBG3 495 aaPredicted RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 CLEC2DQ9UHP7 191 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 MRM2Q9UI43 246 aaKnown RBP4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ATPIF1Q9UII2 106 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 TPRKBQ9Y3C4 175 aa4.63□□□□□ -1.67
C9orf3-205ENST00000427193 ARHGAP21Q5T5U3 1957 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 IRGMA1A4Y4 181 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 TVP23AA6NH52 213 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 TRIM64BA6NI03 449 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 C12orf71A8MTZ7 269 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 ZNF593O00488 134 aaPredicted RBP4.62□□□□□ -1.67
C9orf3-205ENST00000427193 SYNGR3O43761 229 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 SULT1C4O75897 302 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 LALBAP00709 142 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 PTHP01270 115 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 IGKV3-15P01624 115 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 IGHV3-9P01782 118 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 MT-ND2P03891 347 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 OR8G3PP0DMU2 310 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 MSR1P21757 451 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 CD79BP40259 229 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 ETV1P50549 477 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 ACTC1P68032 377 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 ACTA1P68133 377 aa4.62□□□□□ -1.67
C9orf3-205ENST00000427193 BDH1Q02338 343 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms