RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 MRI1Q9BV20 369 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 OCEL1Q9H607 264 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 GPR173Q9NS66 373 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 ERVK-18Q9QC07 812 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 MYRFQ9Y2G1 1151 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 IGKV1D-17A0A075B6S4 117 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 MPZP25189 248 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 ACTC1P68032 377 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 ACTA1P68133 377 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 ODF4Q2M2E3 257 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 BTNL3Q6UXE8 466 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 KCTD8Q6ZWB6 473 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 OR5T2Q8NGG2 359 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 OR2G2Q8NGZ5 317 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 PELI1Q96FA3 418 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 RDH12Q96NR8 316 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 TECTBQ96PL2 329 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 TBX15Q96SF7 602 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 DNTTIP1Q9H147 329 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 SMPD3Q9NY59 655 aaPredicted RBP17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 FRRS1LQ9P0K9 344 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 GNG8Q9UK08 70 aa17.05■□□□□ 0.32
PKNOX1-202ENST00000418336 IGKV1-27A0A075B6S5 117 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 ENSAO43768 121 aaKnown RBP17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 BAG2O95816 211 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 ATP6V1E1P36543 226 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 UBE2V2Q15819 145 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 DGUOKQ16854 277 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 C11orf91Q3C1V1 193 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 ARMCX4Q5H9R4 360 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 LPCAT4Q643R3 524 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 THAP5Q7Z6K1 395 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 ZFAND2BQ8WV99 257 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 HIST1H2AAQ96QV6 131 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 SIRPDQ9H106 197 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 SNTG1Q9NSN8 517 aa17.04■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF879B4DU55 563 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 ANKRD65E5RJM6 399 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 SYNGR1O43759 233 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 NOS1APO75052 506 aaPredicted RBP17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 SFTPBP07988 381 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 GMFBP60983 142 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 SCGB2A2Q13296 93 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 SMN1Q16637 294 aaKnown RBP17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 CD276Q5ZPR3 534 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 HAGHLQ6PII5 290 aaPredicted RBP17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 KCTD20Q7Z5Y7 419 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 CALHM1Q8IU99 346 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 ACBD7Q8N6N7 88 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 POC1AQ8NBT0 407 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF488Q96MN9 340 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 ISG20L2Q9H9L3 353 aaKnown RBP17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 HES4Q9HCC6 221 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 AMBNQ9NP70 447 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 NLKQ9UBE8 527 aa17.03■□□□□ 0.32
PKNOX1-202ENST00000418336 IGHV3OR16-10A0A075B7F0 116 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 LOC107986453A0A1B0GWG9 222 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 DAPL1A0PJW8 107 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 H3BSH0 61 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 MPZL2O60487 215 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 ISG15P05161 165 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 PGA5P0DJD9 388 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 PSG2P11465 335 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 PEX2P28328 305 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 ERVK11-1P61568 191 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 ADARB1P78563 741 aaKnown RBP17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 GALEQ14376 348 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 SIGLECL1Q8N7X8 197 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 OR10AC1Q8NH08 325 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 C8orf46Q8TAG6 207 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF418Q8TF45 676 aaPredicted RBP17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 JAM3Q9BX67 310 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 SUCNR1Q9BXA5 334 aa17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 RPUSD1Q9UJJ7 312 aaKnown RBP17.02■□□□□ 0.32
PKNOX1-202ENST00000418336 TENM1Q9UKZ4 2725 aa17.02■□□□□ 0.31
PKNOX1-202ENST00000418336 FBN3Q75N90 2809 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 TRAV40A0A0B4J280 105 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 OR4C45A6NMZ5 311 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 OR2AT4A6NND4 320 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 J3QT63 122 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 SIGLEC5O15389 551 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 SYT7O43581 403 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 CLIC3O95833 236 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 ACAA1P09110 424 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 UBCP0CG48 685 aaKnown RBP17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 HAAOP46952 286 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 CCR9P51686 369 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 RAB40BQ12829 278 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 RCN1Q15293 331 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNF691Q5VV52 312 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 CRIP3Q6Q6R5 217 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 ACP7Q6ZNF0 438 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 OR52I1Q8NGK6 324 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 STMN2Q93045 179 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 ADAT3Q96EY9 351 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 C4orf36Q96KX1 117 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms