RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DMRTC1Q5HYR2 192 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 UTS2BQ765I0 119 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF485Q8NCK3 441 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 DEFB108BQ8NET1 73 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 OR51A4Q8NGJ6 313 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 OR10AC1Q8NH08 325 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 OR51F2Q8NH61 342 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 RPS4Y2Q8TD47 263 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 GPR148Q8TDV2 347 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 TSEN15Q8WW01 171 aaKnown RBP19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 SMIM19Q96E16 107 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 ADAT3Q96EY9 351 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 TMEM246Q9BRR3 403 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 METTL17Q9H7H0 456 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 FAM157AC9JC47 383 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 RGS10O43665 173 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 OCM2P0CE71 109 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 OCMP0CE72 109 aaPredicted RBP19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF16P17020 682 aaPredicted RBP19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 PRKACBP22694 351 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 HAAOP46952 286 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 MICBQ29980 383 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 SFRP4Q6FHJ7 346 aaPredicted RBP19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 XAF1Q6GPH4 301 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 HAGHLQ6PII5 290 aaPredicted RBP19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 DCDC5Q6ZRR9 648 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 NLRC3Q7RTR2 1065 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 SERPINA12Q8IW75 414 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 OR5D14Q8NGL3 314 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 KCNS2Q9ULS6 477 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF281Q9Y2X9 895 aa19.35■□□□□ 0.69
SMARCB1-205ENST00000417137 FAM230AA0A1W2PPH8 454 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 CEACAM18A8MTB9 384 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 SRRM5B3KS81 715 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 C3orf80F5H4A9 247 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 CD2P06729 351 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 MSMBP08118 114 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 MUC1P15941 1255 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 HOXB4P17483 251 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 ATF1P18846 271 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 CD80P33681 288 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 DMKNQ6E0U4 476 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 DNAAF1Q8NEP3 725 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 TRMT10AQ8TBZ6 339 aaKnown RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 AQP3Q92482 292 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 BORCS8Q96FH0 119 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 PAK1IP1Q9NWT1 392 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 POLDIP2Q9Y2S7 368 aa19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 SIRT4Q9Y6E7 314 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-205ENST00000417137 FOXH1O75593 365 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 LALBAP00709 142 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 WNT2P09544 360 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 RPS2P15880 293 aaKnown RBP19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 PCMT1P22061 227 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 EEF1B2P24534 225 aaKnown RBP19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 ATP1B3P54709 279 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 DVL1P1P54792 670 aaPredicted RBP19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 BDH1Q02338 343 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 TEX36Q5VZQ5 186 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 GLCCI1Q86VQ1 547 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 C19orf18Q8NEA5 215 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 NPRL2Q8WTW4 380 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 GHSRQ92847 366 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 SPSB1Q96BD6 273 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 C12orf43Q96C57 262 aaKnown RBP19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 NEIL1Q96FI4 390 aaPredicted RBP19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 CCDC90BQ9GZT6 254 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 ZCCHC4Q9H5U6 513 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 DNAJB11Q9UBS4 358 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 NAV3Q8IVL0 2385 aa19.33■□□□□ 0.68
SMARCB1-205ENST00000417137 ABCA2Q9BZC7 2435 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 TRAV20A0A0B4J274 112 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 F5H0A9 414 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 J3QT63 122 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 RBP2P50120 134 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 ACSM1Q08AH1 577 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 SPHARQ15513 63 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 ESCO2Q56NI9 601 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 PRSS48Q7RTY5 328 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 PARP16Q8N5Y8 322 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 OR8B3Q8NGG8 313 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 OR8B2Q96RD0 313 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 PKIBQ9C010 78 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 LPAR2Q9HBW0 351 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 RASL12Q9NYN1 266 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 LRCH1Q9Y2L9 728 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 CSPG4Q6UVK1 2322 aa19.32■□□□□ 0.68
SMARCB1-205ENST00000417137 AKR7A2O43488 359 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 PLPP2O43688 288 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 RHBDL1O75783 438 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 ALX3O95076 343 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 CD1AP06126 327 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 EGR1P18146 543 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 GLRA1P23415 457 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 IRF3Q14653 427 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 YIF1BQ5BJH7 314 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 LHFPL2Q6ZUX7 228 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 ZFP41Q8N8Y5 198 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 SGCDQ92629 289 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 TMEM186Q96B77 213 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms