RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 MYO7BQ6PIF6 2116 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 C6orf201Q7Z4U5 140 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 SGPP2Q8IWX5 399 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 LRRC18Q8N456 261 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 SHDQ96IW2 340 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 PLEKHJ1Q9NW61 149 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 K7EPK0 472 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 TP53I11O14683 189 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 MTRF1O75570 445 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 ZNF708P17019 499 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 RFC3P40938 356 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 AKR1D1P51857 326 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 ENDOGQ14249 297 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 C10orf128Q5T292 105 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 FAM71E2Q8N5Q1 922 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 MCTS1Q9ULC4 181 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 MRPS17Q9Y2R5 130 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 EML6Q6ZMW3 1958 aa16.65■□□□□ 0.26
TNFRSF8-202ENST00000413146 IGKV1D-8A0A087WSZ0 117 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 CST4P01036 141 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 RPL12P30050 165 aaKnown RBP16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 RAB13P51153 203 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 ZNF133P52736 654 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 DNASE2BQ8WZ79 361 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 PCDHGA1Q9Y5H4 931 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 DKK1O94907 266 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 IFNA21P01568 189 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 SULT1A2P50226 295 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 PHYHD1Q5SRE7 291 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 ZNF385CQ66K41 422 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 OR2A2Q6IF42 318 aa16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 CHCHD2Q9Y6H1 151 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF8-202ENST00000413146 PRUNE2Q8WUY3 3088 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 DHRS7CA6NNS2 312 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 RNASEK-C17orf49H0YIS7 233 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 M0R135 149 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 RRP8O43159 456 aaKnown RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 CTSDP07339 412 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 SFTA3P0C7M3 94 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 HOXA1P49639 335 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 LCN10Q6JVE6 187 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 TMEM54Q969K7 222 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 ZNF799Q96GE5 643 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 PHF7Q9BWX1 381 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 NPIPA2E9PIF3 369 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 NPIPA3F8WFD2 350 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 FBXO24O75426 580 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 APOC1P02654 83 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 RPL35P42766 123 aaKnown RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 PDZK1IP1Q13113 114 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 NABP1Q96AH0 204 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 C10orf35Q96D05 121 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 PIGQQ9BRB3 760 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 HDHD3Q9BSH5 251 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 RBM24Q9BX46 236 aaKnown RBP16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 PLEK2Q9NYT0 353 aa16.63■□□□□ 0.25
TNFRSF8-202ENST00000413146 DEDDO75618 318 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 TMEM225BP0DP42 221 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 FCGR2CP31995 323 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 H3F3AP84243 136 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 TMEM268Q5VZI3 342 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 DTX1Q86Y01 620 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 CCDC54Q8NEL0 328 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 ZNF385AQ96PM9 386 aaKnown RBP16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 PARP11Q9NR21 331 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 FBXL17Q9UF56 701 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 PADI1Q9ULC6 663 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 A0A087WZY1 265 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 IGHV3-15A0A0B4J1V0 119 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 CRYM-AS1A6NIL9 109 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 JTBO76095 146 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 HEXAP06865 529 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 NFYBP25208 207 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 F2RL1P55085 397 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 SHEQ5VZ18 495 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 FOXL2NBQ6ZUU3 175 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 SPTSSAQ969W0 71 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 Q96M66 194 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 PRRX2Q99811 253 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 BIN3Q9NQY0 253 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 ANXA10Q9UJ72 324 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 TUBD1Q9UJT1 453 aa16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 LSM5Q9Y4Y9 91 aaKnown RBP16.62■□□□□ 0.25
TNFRSF8-202ENST00000413146 AGPAT2O15120 278 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 DHHO43323 396 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 GAPDHP04406 335 aaKnown RBP16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 DBHP09172 617 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 OTX1P32242 354 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 SPEM2Q0P670 501 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 SHBQ15464 509 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 RSPO1Q2MKA7 263 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 ZNF528Q3MIS6 628 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 FAM76BQ5HYJ3 339 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 AVPI1Q5T686 147 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 GGNBP1Q5YKI7 109 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 OPN5Q6U736 354 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 Q6ZSR3 168 aa16.61■□□□□ 0.25
TNFRSF8-202ENST00000413146 PPP1R3BQ86XI6 285 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms