RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RAD51DO75771 328 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 MPZL1O95297 269 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OR4Q2P0C623 313 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TAL1P17542 331 aaPredicted RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 FCARP24071 287 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SRD5A2P31213 254 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PTH2RP49190 550 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HINT1P49773 126 aaPredicted RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 P2RX1P51575 399 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TMPRSS3P57727 454 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ARG2P78540 354 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SRSF1Q07955 248 aaKnown RBP eCLIP4.61□□□□□ -1.675e-10■■■■□ 24.7
HERC4-205ENST00000412272 TMEM267Q0VDI3 215 aaPredicted RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 PDGFRLQ15198 375 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TMEM42Q69YG0 159 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 AMMECR1LQ6DCA0 310 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 C17orf64Q86WR6 236 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TCEANCQ8N8B7 351 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 COX18Q8N8Q8 333 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OR2Y1Q8NGV0 311 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 RPS4Y2Q8TD47 263 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HPDLQ96IR7 371 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PPDPFQ9H3Y8 114 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PXMP2Q9NR77 195 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TAS2R8Q9NYW2 309 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HELZP42694 1942 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 YDJCA8MPS7 323 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ZBTB42B2RXF5 422 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TOX4O94842 621 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PPP1R3DO95685 299 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 DDAH2O95865 285 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 RAB40ALP0C0E4 278 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 MMP9P14780 707 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 EDNRBP24530 442 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HTR1FP30939 366 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 FAUP35544 74 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 SOX18P35713 384 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GABRA2P47869 451 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 RND2P52198 227 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SLC25A1P53007 311 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HIST1H3AP68431 136 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 LRRC10Q5BKY1 277 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GCSAMLQ5JQS6 135 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SBSNQ6UWP8 590 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SLC16A9Q7RTY1 509 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TSTD1Q8NFU3 115 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GPR32P1Q8NGA4 272 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OR5AK2Q8NH90 309 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PLD4Q96BZ4 506 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 P2RX4Q99571 388 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 Q9N2K0 584 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 MRPS16Q9Y3D3 137 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 A0A0B4J2A0 478 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TAPBPO15533 448 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HYPMO75409 117 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 AGFG2O95081 481 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ADORA2BP29275 332 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GABRA3P34903 492 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SULT1A2P50226 295 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PCK2Q16822 640 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 CDCP2Q5VXM1 449 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 UFSP1Q6NVU6 142 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SUN3Q8TAQ9 357 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 FCAMRQ8WWV6 532 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 RNF183Q96D59 192 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SIGLEC12Q96PQ1 595 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 VAMP8Q9BV40 100 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 CIPCQ9C0C6 399 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SLC35B3Q9H1N7 401 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 UQCR10Q9UDW1 63 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SHPKQ9UHJ6 478 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ERRFI1Q9UJM3 462 aaPredicted RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 SERTAD3Q9UJW9 196 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 UTRNP46939 3433 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 PRSS37A4D1T9 235 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OR2T8A6NH00 312 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 RAB29O14966 203 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 HAND1O96004 215 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 IGLV3-25P01717 112 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OPN1SWP03999 348 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 IGLC2P0DOY2 106 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 IGLC3P0DOY3 106 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 CDKN2AP42771 156 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 TSFMP43897 325 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 ATP1B3P54709 279 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GAGE5Q13069 117 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GAGE6Q13070 117 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TMEM240Q5SV17 173 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ZNF440Q8IYI8 595 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 GALNT16Q8N428 558 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 IQCF1Q8N6M8 205 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ACOT4Q8N9L9 421 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 OR4L1Q8NH43 312 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TNFAIP8L1Q8WVP5 186 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 SEH1LQ96EE3 360 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 TNFRSF13CQ96RJ3 184 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ZNF160Q9HCG1 818 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 APMAPQ9HDC9 416 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms