RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SPSB1Q96BD6 273 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 ZFP57Q9NU63 452 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 MLXQ9UH92 298 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 IGHV5-10-1A0A0J9YXX1 117 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 A0A1W2PQM1 296 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 CRYM-AS1A6NIL9 109 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 DHHO43323 396 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 DEDDO75618 318 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 FCGR3AP08637 254 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 CD63P08962 238 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 HOXB5P09067 269 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 RFC3P40938 356 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 TMEM88Q6PEY1 159 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 PIGQQ9BRB3 760 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 NAA11Q9BSU3 229 aaPredicted RBP14.6□□□□□ -0.07
LIMS2-208ENST00000410011 WDR54Q9H977 334 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 GSKIPQ9P0R6 139 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 FOXD3Q9UJU5 478 aaPredicted RBP14.6□□□□□ -0.07
LIMS2-208ENST00000410011 PIGLQ9Y2B2 252 aa14.6□□□□□ -0.07
LIMS2-208ENST00000410011 M0R135 149 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 FAHP16930 419 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 FAM3AP98173 230 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 SPEM2Q0P670 501 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 PHYHD1Q5SRE7 291 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 RPL7L1Q6DKI1 246 aaKnown RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 RPUSD3Q6P087 351 aaKnown RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 DHRS11Q6UWP2 260 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 PPP1R3BQ86XI6 285 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 SPTSSAQ969W0 71 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 CPNE2Q96FN4 548 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 ZNF799Q96GE5 643 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 ANGPTL4Q9BY76 406 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 OR2S2Q9NQN1 319 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 PLEKHJ1Q9NW61 149 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 MCTS1Q9ULC4 181 aaKnown RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 RNASEK-C17orf49H0YIS7 233 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 LRP3O75074 770 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 IFNA21P01568 189 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 MUC1P15941 1255 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 PRKACAP17612 351 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 DTYMKP23919 212 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 RPL12P30050 165 aaKnown RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 IAH1Q2TAA2 248 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 FAM27BQ5VT28 67 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 LCN10Q6JVE6 187 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 OPN5Q6U736 354 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 SKA3Q8IX90 412 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 FNDC9Q8TBE3 224 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 ZNF2Q9BSG1 426 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 HRH4Q9H3N8 390 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 PLEKHA2Q9HB19 425 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 ANXA10Q9UJ72 324 aa14.59□□□□□ -0.07
LIMS2-208ENST00000410011 NXT1Q9UKK6 140 aaKnown RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 NCOA6Q14686 2063 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-208ENST00000410011 OR5H15A6NDH6 313 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 K7EPK0 472 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 KNG1P01042 644 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 SERPINA5P05154 406 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 PAX6P26367 422 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 F2RL1P55085 397 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 DSCR4P56555 118 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-208ENST00000410011 S100A10P60903 97 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 SMCO1Q147U7 214 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 PCOLCEQ15113 449 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 PLXDC2Q6UX71 529 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 ASCL4Q6XD76 172 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 FAM71E2Q8N5Q1 922 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 DMBX1Q8NFW5 382 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 GALNT14Q96FL9 552 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 CEP290O15078 2479 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 IGKV1D-8A0A087WSZ0 117 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 LY6G6EA0A0G2JKS1 128 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 SFTPBP07988 381 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 LPAR6P43657 344 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 RAB13P51153 203 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 CCL7P80098 99 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 MRPS34P82930 218 aaKnown RBP14.58□□□□□ -0.08
LIMS2-208ENST00000410011 C6orf201Q7Z4U5 140 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 DTX1Q86Y01 620 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 CBLN2Q8IUK8 224 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 UBAC2Q8NBM4 344 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 ZNF385AQ96PM9 386 aaKnown RBP14.58□□□□□ -0.08
LIMS2-208ENST00000410011 PRRX2Q99811 253 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 METTL9Q9H1A3 318 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 ARV1Q9H2C2 271 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 ZNF701Q9NV72 531 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-208ENST00000410011 U3KQA8 63 aa14.58□□□□□ -0.08
LIMS2-208ENST00000410011 NPIPA2E9PIF3 369 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 NPIPA3F8WFD2 350 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 FBXO24O75426 580 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 NPBWR1P48145 328 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 ZNF528Q3MIS6 628 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 GALNTL5Q7Z4T8 443 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM200AQ86VY9 491 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 LRTM2Q8N967 370 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 OR9K2Q8NGE7 335 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 NPRL2Q8WTW4 380 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 MAFIPQ8WZ33 124 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms