RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR52N4Q8NGI2 321 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 YIPF6Q96EC8 236 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 NKX3-1Q99801 234 aaPredicted RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 TLNRD1Q9H1K6 362 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 SLC7A11Q9UPY5 501 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 TRDV1A0A1B0GX56 115 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 RHBDL1O75783 438 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 RAB3AP20336 220 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 HAAOP46952 286 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 ALDH3B2P48448 385 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 MRPS11P82912 194 aaKnown RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 DNAAF1Q8NEP3 725 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 OR13F1Q8NGS4 319 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 TECTBQ96PL2 329 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 METTL17Q9H7H0 456 aaPredicted RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 SHISA3A0PJX4 238 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 TMEM210A6NLX4 147 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 ADRA2CP18825 462 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 FSTP19883 344 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 GADD45AP24522 165 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 RBP2P50120 134 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 MTCP1P56278 107 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 MZT1Q08AG7 82 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 CNN3Q15417 329 aaKnown RBP13.43□□□□□ -0.26
HMGA1-204ENST00000401473 HAGHLQ6PII5 290 aaPredicted RBP13.43□□□□□ -0.26
HMGA1-204ENST00000401473 WDR82Q6UXN9 313 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 SPSB1Q96BD6 273 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 BORCS8Q96FH0 119 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 BARX1Q9HBU1 254 aaPredicted RBP13.43□□□□□ -0.26
HMGA1-204ENST00000401473 TMEM138Q9NPI0 162 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 TMEM106BQ9NUM4 274 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 C1orf123Q9NWV4 160 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 FOXJ3Q9UPW0 622 aa13.43□□□□□ -0.26
HMGA1-204ENST00000401473 LRP5LA4QPB2 252 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 A6NLC8 198 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CYB5R3P00387 301 aaPredicted RBP13.42□□□□□ -0.26
HMGA1-204ENST00000401473 MAS1P04201 325 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 GALP22466 123 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 RIN1Q13671 783 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 KISS1Q15726 138 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 HFEQ30201 348 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 Q5PR19 223 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 FAM201AQ5SY85 155 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 WFDC11Q8NEX6 87 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 Q8TCH9 128 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 AQP3Q92482 292 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 ERGIC1Q969X5 290 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 RFT1Q96AA3 541 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 RNF167Q9H6Y7 350 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 FN3KRPQ9HA64 309 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 DLL4Q9NR61 685 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
HMGA1-204ENST00000401473 STUB1Q9UNE7 303 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 DOCK11Q5JSL3 2073 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 TMEM178BH3BS89 294 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 SYNGR1O43759 233 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 ZNF205O95201 554 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 LHBP01229 141 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 PRKACBP22694 351 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
HMGA1-204ENST00000401473 FGF9P31371 208 aaPredicted RBP13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CARTPTQ16568 116 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 LRRTM1Q86UE6 522 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 LYPD6Q86Y78 171 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 ZNF573Q86YE8 665 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 THRSPQ92748 146 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CHCHD6Q9BRQ6 235 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 FUNDC2Q9BWH2 189 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CHODLQ9H9P2 273 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 CKLFQ9UBR5 152 aa13.42□□□□□ -0.26
HMGA1-204ENST00000401473 ALDOBP05062 364 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 HCKP08631 526 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-204ENST00000401473 BDKRB2P30411 391 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 CFHR2P36980 270 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 PPP3R1P63098 170 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 CLEC12BQ2HXU8 276 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 ZNF181Q2M3W8 571 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 LHFPL2Q6ZUX7 228 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 GCSAMQ8N6F7 178 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 PHYHIPQ92561 330 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 CENPOQ9BU64 300 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 TLN2Q9Y4G6 2542 aa13.41□□□□□ -0.26
HMGA1-204ENST00000401473 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 AKR7A2O43488 359 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 PLATP00750 562 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 MPZP25189 248 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 ATP1B3P54709 279 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 TMEM33P57088 247 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 C1QL2Q7Z5L3 287 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 SATL1Q86VE3 508 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 C10orf105Q8TEF2 133 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms