RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 CHST5Q9GZS9 411 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 TLNRD1Q9H1K6 362 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 TMEM100Q9NV29 134 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 ENPP5Q9UJA9 477 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 PIGLQ9Y2B2 252 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 NOP16Q9Y3C1 178 aaKnown RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 RHBDD3Q9Y3P4 386 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 N6AMT1Q9Y5N5 214 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 MPC1Q9Y5U8 109 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 A0A1W2PPW3 197 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 PLSCR5A0PG75 271 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 A8MV72 311 aaPredicted RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 ZNF879B4DU55 563 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 CCRL2O00421 344 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 LMX1BO60663 402 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 GATBO75879 557 aaKnown RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 NAT2P11245 290 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 FAHP16930 419 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 CRYBB2P43320 205 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 ALDH3B1P43353 468 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 EFNA4P52798 201 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 MRPS11P82912 194 aaKnown RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 SLC3A1Q07837 685 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 MAB21L1Q13394 359 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 TSTQ16762 297 aaKnown RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 NKPD1Q17RQ9 610 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 ODF4Q2M2E3 257 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 CLVS2Q5SYC1 327 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 CRIP3Q6Q6R5 217 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 SERPINA12Q8IW75 414 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 OR5AS1Q8N127 324 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 SPERTQ8NA61 448 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 BHLHE23Q8NDY6 225 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 OR13F1Q8NGS4 319 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 OR13C5Q8NGS8 318 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 HPSE2Q8WWQ2 592 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 OR5P3Q8WZ94 311 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 YIPF6Q96EC8 236 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 DERL3Q96Q80 235 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 FGF23Q9GZV9 251 aaPredicted RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 BARX1Q9HBU1 254 aaPredicted RBP7.76□□□□□ -1.17
VPS53-203ENST00000401468 MSL2Q9HCI7 577 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 IL19Q9UHD0 177 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 PMF1-BGLAPU3KQ54 211 aa7.76□□□□□ -1.17
VPS53-203ENST00000401468 IGKV1-9A0A0C4DH69 117 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 TRDV1A0A1B0GX56 115 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 ANKRD61A6NGH8 418 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 ANKRD30BLA7E2S9 258 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 RNF212BA8MTL3 300 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 H0YL77 283 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 PIN1P1O15428 100 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 NCR1O76036 304 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 SERPINA3P01011 423 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 NRASP01111 189 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 UCHL1P09936 223 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 OCM2P0CE71 109 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 HSMCR30P0CW71 290 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 CA6P23280 308 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 MAPK3P27361 379 aaPredicted RBP7.75□□□□□ -1.17
VPS53-203ENST00000401468 FGF9P31371 208 aaPredicted RBP7.75□□□□□ -1.17
VPS53-203ENST00000401468 MAGEB1P43366 347 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 RPS25P62851 125 aaKnown RBP7.75□□□□□ -1.17
VPS53-203ENST00000401468 PRDX4Q13162 271 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 UBE2V2Q15819 145 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 NEDD8Q15843 81 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 CEACAM21Q3KPI0 293 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 COMMD2Q86X83 199 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 DNAAF1Q8NEP3 725 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 OR5A2Q8NGI9 324 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 OR5D14Q8NGL3 314 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 OR13C3Q8NGS6 347 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 NEU4Q8WWR8 484 aaPredicted RBP7.75□□□□□ -1.17
VPS53-203ENST00000401468 TMEM106AQ96A25 262 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 FGGYQ96C11 551 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 OR14A2Q96R54 314 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 ADAT1Q9BUB4 502 aaKnown RBP7.75□□□□□ -1.17
VPS53-203ENST00000401468 BPESC1Q9GZL8 116 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 PPP1R3EQ9H7J1 279 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 VCX3AQ9NNX9 186 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 DYNLRB1Q9NP97 96 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 FOXJ3Q9UPW0 622 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 DHDHQ9UQ10 334 aa7.75□□□□□ -1.17
VPS53-203ENST00000401468 PNMA8CA0A1B0GUJ8 204 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PQLC2LA1A4F0 135 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 OR5B21A6NL26 309 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 TMEM210A6NLX4 147 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ZNF850A8MQ14 1090 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 WNT9BO14905 357 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 SULT1B1O43704 296 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 RP2O75695 350 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 FSTL3O95633 263 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 HLA-DPB1P04440 258 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ALDOBP05062 364 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 CD2P06729 351 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 USF1P22415 310 aaPredicted RBP7.74□□□□□ -1.17
VPS53-203ENST00000401468 PSMB9P28065 219 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms