RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SRSF10O75494 262 aaKnown RBP11.06□□□□□ -0.64
VCX3A-202ENST00000398729 RHBDL1O75783 438 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 NRASP01111 189 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 IGHV1-69P01742 117 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 POLR2IP36954 125 aaKnown RBP11.06□□□□□ -0.64
VCX3A-202ENST00000398729 IL13RA1P78552 427 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 C16orf87Q6PH81 154 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 Q6YL49 198 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 ELMOD2Q8IZ81 293 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 CMTM4Q8IZR5 234 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 LY6G5BQ8NDX9 201 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 ANGPTL6Q8NI99 470 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 TMIGD2Q96BF3 282 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 DCTN5Q9BTE1 182 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 OSBPL10Q9BXB5 764 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 GABARAPL3Q9BY60 117 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 RIBC2Q9H4K1 309 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 ONECUT1Q9UBC0 465 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 OR52A1Q9UKL2 312 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 SNX5Q9Y5X3 404 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 SAC3D1A6NKF1 404 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 OR2AT4A6NND4 320 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 SIGLEC5O15389 551 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 MAGEB4O15481 346 aaPredicted RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 KRT8P05787 483 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 ACAA1P09110 424 aaPredicted RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 OR2T7P0C7T2 308 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 SELLP14151 372 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 HTR1FP30939 366 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 GABRA2P47869 451 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 CLVS2Q5SYC1 327 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF684Q5T5D7 378 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 HAGHLQ6PII5 290 aaPredicted RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 PLEKHG7Q6ZR37 379 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 VMO1Q7Z5L0 202 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 KIR3DL3Q8N743 410 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 OR8J1Q8NGP2 316 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 OR2T27Q8NH04 317 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 AQP3Q92482 292 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 H1FXQ92522 213 aaKnown RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 GAFA1Q96PS6 74 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 TBX5Q99593 518 aa11.05□□□□□ -0.64
VCX3A-202ENST00000398729 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 SLC25A10Q9UBX3 287 aaPredicted RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 MRM2Q9UI43 246 aaKnown RBP11.05□□□□□ -0.64
VCX3A-202ENST00000398729 DLGAP1O14490 977 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 RPP14O95059 124 aaKnown RBP11.04□□□□□ -0.64
VCX3A-202ENST00000398729 MELTFP08582 738 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 NDUFB7P17568 137 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 ATP6V1E1P36543 226 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 CAV3P56539 151 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 CDC42P60953 191 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 TMED1Q13445 227 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 DGUOKQ16854 277 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 TMEM42Q69YG0 159 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 ASRGL1Q7L266 308 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 YIPF7Q8N8F6 280 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 C8orf46Q8TAG6 207 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 PYDC1Q8WXC3 89 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 RFKQ969G6 155 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 RASL12Q9NYN1 266 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 POMT1Q9Y6A1 747 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 V9GYS6 101 aa11.04□□□□□ -0.64
VCX3A-202ENST00000398729 A0A1B0GTI1 187 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 A0A1W2PQL4 384 aaPredicted RBP11.03□□□□□ -0.64
VCX3A-202ENST00000398729 DHRS7CA6NNS2 312 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 POM121CA8CG34 1229 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 APOL3O95236 402 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 TFF1P04155 84 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 CRYBA1P05813 215 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 PSG2P11465 335 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 METAP1DQ6UB28 335 aaPredicted RBP11.03□□□□□ -0.64
VCX3A-202ENST00000398729 FIP1L1Q6UN15 594 aaKnown RBP11.03□□□□□ -0.64
VCX3A-202ENST00000398729 TREML4Q6UXN2 200 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 OR10H4Q8NGA5 316 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 OR14K1Q8NGZ2 314 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 TBC1D15Q8TC07 691 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 SSMEM1Q8WWF3 244 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 UNKLQ9H9P5 680 aaKnown RBP11.03□□□□□ -0.64
VCX3A-202ENST00000398729 SIRT7Q9NRC8 400 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 IMPAD1Q9NX62 359 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.03□□□□□ -0.64
VCX3A-202ENST00000398729 SLC22A13Q9Y226 551 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 FAM96BQ9Y3D0 163 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
VCX3A-202ENST00000398729 IGKV1D-17A0A075B6S4 117 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 A0A0U1RQK1 487 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms