RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FGGYQ96C11 551 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 SLC7A11Q9UPY5 501 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 TPRKBQ9Y3C4 175 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 SIRT4Q9Y6E7 314 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 TRAV38-1A0A0B4J264 116 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 SRRM5B3KS81 715 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 RHBDL1O75783 438 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 SERPINA3P01011 423 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 GMFBP60983 142 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 SEC61A1P61619 476 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 DCDC5Q6ZRR9 648 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 GLCCI1Q86VQ1 547 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 OR10Z1Q8NGY1 313 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 RPS4Y2Q8TD47 263 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 TSEN15Q8WW01 171 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 SMIM19Q96E16 107 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 TECTBQ96PL2 329 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 ERGIC3Q9Y282 383 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 PCDHGB5Q9Y5G0 923 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 IGHV3OR15-7A0A075B7D8 119 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 FAM230AA0A1W2PPH8 454 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 AKR7A2O43488 359 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 PLPP2O43688 288 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 RPSAP08865 295 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 HAAOP46952 286 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 DVL1P1P54792 670 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 WNT4P56705 351 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 SLC35A2P78381 396 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 CNN3Q15417 329 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 KCNJ8Q15842 424 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 TEX36Q5VZQ5 186 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 FAM90A1Q86YD7 464 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 ZNF573Q86YE8 665 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 ZFP41Q8N8Y5 198 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 AQP3Q92482 292 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 RGP1Q92546 391 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 TMEM186Q96B77 213 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 HIF1ANQ9NWT6 349 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 MIOXQ9UGB7 285 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 DHDHQ9UQ10 334 aa17.72■□□□□ 0.43
TSPAN4-206ENST00000397408 NIPBLQ6KC79 2804 aaeCLIP17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 J3QT63 122 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 OGG1O15527 345 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 WNT2P09544 360 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 LCN2P80188 198 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 LYPD2Q6UXB3 125 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 UTS2BQ765I0 119 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 NLRC3Q7RTR2 1065 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 NANOGP1Q8N7R0 232 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 OR8B3Q8NGG8 313 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 SEH1LQ96EE3 360 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 NEIL1Q96FI4 390 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 OR8B2Q96RD0 313 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 WDR13Q9H1Z4 485 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 Q9H521 79 aa17.71■□□□□ 0.43
TSPAN4-206ENST00000397408 C2CD3Q4AC94 2353 aa17.71■□□□□ 0.42
TSPAN4-206ENST00000397408 ZFHX3Q15911 3703 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 GYPAP02724 150 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 CRHBPP24387 322 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 TAS2R43P59537 309 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 DOC2BQ14184 412 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 MICBQ29980 383 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 ESCO2Q56NI9 601 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 RNLSQ5VYX0 342 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 DMKNQ6E0U4 476 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 ZNF671Q8TAW3 534 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 MND1Q9BWT6 205 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 CDCA4Q9BXL8 241 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 DUSP21Q9H596 190 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 DNAJB11Q9UBS4 358 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 LRCH1Q9Y2L9 728 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 WNK2Q9Y3S1 2297 aa17.7■□□□□ 0.42
TSPAN4-206ENST00000397408 ANK3Q12955 4377 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 ARHGAP32A7KAX9 2087 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 NF1P21359 2839 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 TRAV20A0A0B4J274 112 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 IGKV1-9A0A0C4DH69 117 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 PNMA8CA0A1B0GUJ8 204 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 SYNGR1O43759 233 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 FOXH1O75593 365 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 MUC1P15941 1255 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 ATF1P18846 271 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 ZFP36P26651 326 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 SOX2P48431 317 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 FUT6P51993 359 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 OR13C9Q8NGT0 318 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 GPR148Q8TDV2 347 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 BORCS8Q96FH0 119 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 POLDIP2Q9Y2S7 368 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 NAV3Q8IVL0 2385 aa17.69■□□□□ 0.42
TSPAN4-206ENST00000397408 IGKV1-27A0A075B6S5 117 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 PHF1O43189 567 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 ADAM20O43506 726 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 RGS10O43665 173 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 OCM2P0CE71 109 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 OCMP0CE72 109 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 GLRA1P23415 457 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 CPT2P23786 658 aa17.68■□□□□ 0.42
TSPAN4-206ENST00000397408 AZGP1P25311 298 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms