RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 OGG1O15527 345 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 ZNF254O75437 659 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 PNPP00491 289 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 DCTDP32321 178 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 TGM4P49221 684 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 MAB21L1Q13394 359 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 ZMYND11Q15326 602 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 FAHD2BQ6P2I3 314 aaPredicted RBP12.24□□□□□ -0.45
SEC13-208ENST00000397109 RPL22L1Q6P5R6 122 aaKnown RBP12.24□□□□□ -0.45
SEC13-208ENST00000397109 PRSS45Q7RTY3 260 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 KRT77Q7Z794 578 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 ZNF679Q8IYX0 411 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 RFLNBQ8N5W9 214 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 OR4M2Q8NGB6 313 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 OR56B2PQ8NGI1 322 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 Q8TCH9 128 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 AP3S1Q92572 193 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 FAHD2AQ96GK7 314 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 OR8B4Q96RC9 309 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 ADAT1Q9BUB4 502 aaKnown RBP12.24□□□□□ -0.45
SEC13-208ENST00000397109 G6PC2Q9NQR9 355 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 COL6A5A8TX70 2615 aa12.24□□□□□ -0.45
SEC13-208ENST00000397109 PPIAL4EA0A075B759 164 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 PPIAL4CA0A0B4J2A2 164 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 PPIAL4DF5H284 164 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 SULT1C4O75897 302 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 LALBAP00709 142 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 PPIAL4FP0DN26 164 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 ZNF12P17014 697 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 RPS19P39019 145 aaKnown RBP12.23□□□□□ -0.45
SEC13-208ENST00000397109 PPP5CP53041 499 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 FAM3AP98173 230 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 SCGB2A2Q13296 93 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 DCAF12L2Q5VW00 463 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 DMKNQ6E0U4 476 aaPredicted RBP12.23□□□□□ -0.45
SEC13-208ENST00000397109 C16orf87Q6PH81 154 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 SSX6Q7RTT6 188 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 MROQ9BYG7 248 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 ISG20L2Q9H9L3 353 aaKnown RBP12.23□□□□□ -0.45
SEC13-208ENST00000397109 FN3KRPQ9HA64 309 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 BRD7Q9NPI1 651 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 C14orf119Q9NWQ9 140 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 ZNF391Q9UJN7 358 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 ARHGAP32A7KAX9 2087 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
SEC13-208ENST00000397109 IGHV3-64DA0A0J9YX35 117 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 ACOD1A6NK06 481 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 GABRPO00591 440 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 TMEM127O75204 238 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 RGS9O75916 674 aaPredicted RBP12.22□□□□□ -0.45
SEC13-208ENST00000397109 PTBP3O95758 552 aaKnown RBP12.22□□□□□ -0.45
SEC13-208ENST00000397109 CYB5R3P00387 301 aaPredicted RBP12.22□□□□□ -0.45
SEC13-208ENST00000397109 ANOS1P23352 680 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 TGFBR1P36897 503 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 PMELP40967 661 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 RPS25P62851 125 aaKnown RBP12.22□□□□□ -0.45
SEC13-208ENST00000397109 FABP5Q01469 135 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 TPRA1Q86W33 373 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 FTMTQ8N4E7 242 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 CSNK2A3Q8NEV1 391 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 ITFG2Q969R8 447 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 TBX5Q99593 518 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 RNF167Q9H6Y7 350 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 MIOXQ9UGB7 285 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 POLR3KQ9Y2Y1 108 aaPredicted RBP12.22□□□□□ -0.45
SEC13-208ENST00000397109 LRP12Q9Y561 859 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 MXRA5Q9NR99 2828 aa12.22□□□□□ -0.45
SEC13-208ENST00000397109 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 F5H0A9 414 aaPredicted RBP12.21□□□□□ -0.45
SEC13-208ENST00000397109 J3QLW9 94 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 SC5DO75845 299 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 GATBO75879 557 aaKnown RBP12.21□□□□□ -0.45
SEC13-208ENST00000397109 CDRT1O95170 752 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 ZNF19P17023 458 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 MTNR1BP49286 362 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 GSK3AP49840 483 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 OR12D2P58182 307 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 PSMA6P60900 246 aaKnown RBP12.21□□□□□ -0.45
SEC13-208ENST00000397109 LCN2P80188 198 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 HNRNPA0Q13151 305 aaKnown RBP12.21□□□□□ -0.45
SEC13-208ENST00000397109 ESCO2Q56NI9 601 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 C22orf42Q6IC83 251 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 RPS4Y2Q8TD47 263 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 TMEM158Q8WZ71 300 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 SMIM19Q96E16 107 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 WDFY2Q96P53 400 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 MDFIQ99750 246 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 UFSP2Q9NUQ7 469 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 MRM2Q9UI43 246 aaKnown RBP12.21□□□□□ -0.45
SEC13-208ENST00000397109 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
SEC13-208ENST00000397109 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 KRT8P05787 483 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 WNT2P09544 360 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms