RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HCKP08631 526 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 H2AFZP0C0S5 128 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 DAOP14920 347 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 AK4P27144 223 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 KIR2DS2P43631 304 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 RIDAP52758 137 aaKnown RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 CDKN2DP55273 166 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 FMODQ06828 376 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 SMCO1Q147U7 214 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 POU6F1Q14863 301 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 SHHQ15465 462 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 TEAD2Q15562 447 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 PRSS8Q16651 343 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 IZUMO4Q1ZYL8 232 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 SYT6Q5T7P8 510 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 WDR74Q6RFH5 385 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 TMEM144Q7Z5S9 345 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 LRRC25Q8N386 305 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 METTL27Q8N6F8 245 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 SDR42E1Q8WUS8 393 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 PPCDCQ96CD2 204 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 CEP170P1Q96L14 293 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 DUX3Q96PT4 197 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 C20orf85Q9H1P6 137 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 C11orf49Q9H6J7 331 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 RPF2Q9H7B2 306 aaKnown RBP3.92□□□□□ -1.78
GABPB1-204ENST00000396464 COMMD9Q9P000 198 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 RLFQ13129 1914 aa3.92□□□□□ -1.78
GABPB1-204ENST00000396464 CD109Q6YHK3 1445 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 FANCAO15360 1455 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 CAMSAP2Q08AD1 1489 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 TDRD15B5MCY1 1934 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 MTCL1Q9Y4B5 1905 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 KDM6BO15054 1643 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 LY6G6EA0A0G2JKS1 128 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 MFNGO00587 321 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SLC17A2O00624 439 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 CRLF1O75462 422 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 FOXH1O75593 365 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SLC25A27O95847 323 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 IGKV1D-16P01601 117 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 EIF4EP06730 217 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 AKR1C4P17516 323 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 VDAC1P21796 283 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 HTR1EP28566 365 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 CRABP2P29373 138 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 TSPOP30536 169 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RPL5P46777 297 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 PPOXP50336 477 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 P2RY4P51582 365 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SRPXP78539 464 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 TFAMQ00059 246 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 BAXQ07812 192 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 CD300CQ08708 224 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SLC10A1Q14973 349 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR1Q1Q15612 314 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 C17orf58Q2M2W7 97 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SPSB3Q6PJ21 355 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 BAIAP2L2Q6UXY1 529 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 Q6ZRP5 223 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 NFE4Q86UQ8 179 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 COMMD7Q86VX2 200 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SKA3Q8IX90 412 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 STPG4Q8N801 248 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR52E4Q8NGH9 312 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR13A1Q8NGR1 328 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR2A12Q8NGT7 310 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR6N1Q8NGY5 312 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SSC4DQ8WTU2 575 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 Q8WTZ3 238 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RXFP2Q8WXD0 754 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 ASB13Q8WXK3 278 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 CLDN23Q96B33 292 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RMND5BQ96G75 393 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 C18orf12Q96KH6 178 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 FAM19A4Q96LR4 140 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 TAPBPLQ9BX59 468 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SELENOIQ9C0D9 397 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 VSIRQ9H7M9 311 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RBM22Q9NW64 420 aaKnown RBP eCLIP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 OR1A1Q9P1Q5 309 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 VAX2Q9UIW0 290 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 VPREB3Q9UKI3 123 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RAB22AQ9UL26 194 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 MOKQ9UQ07 419 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 C14orf166Q9Y224 244 aaKnown RBP3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SIGLEC9Q9Y336 463 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 SLC22A7Q9Y694 548 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 KCNE3Q9Y6H6 103 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 FGD6Q6ZV73 1430 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 ADGRL1O94910 1474 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 PLEKHH2Q8IVE3 1493 aa3.91□□□□□ -1.78
GABPB1-204ENST00000396464 RALGAPA1Q6GYQ0 2036 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SAMD9LQ8IVG5 1584 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 IGLV1-36A0A0B4J1U3 117 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 A0A0B4J2A0 478 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 FOXI3A8MTJ6 420 aaPredicted RBP3.9□□□□□ -1.78
GABPB1-204ENST00000396464 EVPLLA8MZ36 301 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms