RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FAM221AA4D161 298 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 MSTNO14793 375 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 IFNA4P05014 189 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 MST1P26927 711 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 LTBRP36941 435 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 CARD18P57730 90 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 RPS18P62269 152 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 ADAM5Q6NVV9 412 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 TFAP2EQ6VUC0 442 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 TMEM104Q8NE00 496 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 AKR1E2Q96JD6 320 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 PECRQ9BY49 303 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 FAM206AQ9NX38 181 aa10.32□□□□□ -0.76
UBE2D3-209ENST00000394804 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 IFNA1P01562 189 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 RPL23AP62750 156 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 ZNF674Q2M3X9 581 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 RPUSD3Q6P087 351 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 LHFPL2Q6ZUX7 228 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 PUSL1Q8N0Z8 303 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 INTS12Q96CB8 462 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 REEP6Q96HR9 211 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 SUCNR1Q9BXA5 334 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 ANKRD10Q9NXR5 420 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 GPR132Q9UNW8 380 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 CCDC163A0A0D9SF12 145 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 PRSS44E7EML9 344 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 NRASP01111 189 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 IGFBP3P17936 291 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 NKX2-1P43699 371 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 DVL1P1P54792 670 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 COMMD1Q8N668 190 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 SLC30A7Q8NEW0 376 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 PHF7Q9BWX1 381 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 RAB33BQ9H082 229 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 ABCD4O14678 606 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 GDF1P27539 372 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 RAB5CP51148 216 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 UBE2KP61086 200 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 GUCA2BQ16661 112 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 SP6Q3SY56 376 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 GGNBP1Q5YKI7 109 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 TMEM182Q6ZP80 229 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 P4HA3Q7Z4N8 544 aa10.31□□□□□ -0.76
UBE2D3-209ENST00000394804 SRYQ05066 204 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 DPPA2Q7Z7J5 298 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 OR2G3Q8NGZ4 309 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 CPNE4Q96A23 557 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 IGKV3D-11A0A0A0MRZ8 115 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 A0A1B0GTI1 187 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 A0A1W2PP11 408 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 SPRY1O43609 319 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 GPR137BO60478 399 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 CBR1P16152 277 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 FOXL2P58012 376 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 LSM6P62312 80 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 OR51F2Q8NH61 342 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 SLC25A28Q96A46 364 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 PFDN5Q99471 154 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 REG4Q9BYZ8 158 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 OR5H15A6NDH6 313 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 NPIPB13A6NJU9 1138 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 NPIPB4C9JG80 1138 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 FTCDNL1E5RQL4 147 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 SLC34A2O95436 690 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 HBE1P02100 147 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 S100A8P05109 93 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 CTSDP07339 412 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 MIDNQ504T8 468 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 ZNF100Q8IYN0 542 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 LILRB2Q8N423 598 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 CHRNA10Q9GZZ6 450 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 POMT1Q9Y6A1 747 aa10.3□□□□□ -0.76
UBE2D3-209ENST00000394804 RNF222A6NCQ9 220 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 MRPL33O75394 65 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 IL2RAP01589 272 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 CD79AP11912 226 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 AKR1C3P42330 323 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 TMEM33P57088 247 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 TMEM268Q5VZI3 342 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 DRAM2Q6UX65 266 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 NUDT16L1Q9BRJ7 211 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 ADAT1Q9BUB4 502 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 EDEM2Q9BV94 578 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 ST3GAL6Q9Y274 331 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 TCN2P20062 427 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 IKZF1Q13422 519 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 UNC119Q13432 240 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 GUK1Q16774 197 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 STPG1Q5TH74 334 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 FIP1L1Q6UN15 594 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 ATRAIDQ6UW56 229 aa10.29□□□□□ -0.76
UBE2D3-209ENST00000394804 OSR2Q8N2R0 312 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms