RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 TNRC6BQ9UPQ9 1833 aaKnown RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 CYC1P08574 325 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 CNR1P21554 472 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 GABRR1P24046 479 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 CTSSP25774 331 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 HOXA6P31267 233 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 PPIAP62937 165 aaKnown RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 SNTB1Q13884 538 aaKnown RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 CLEC18BQ6UXF7 455 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 OR13G1Q8NGZ3 307 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 TBPP20226 339 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF84P51523 738 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 Q0VFX4 171 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 TCEAL6Q6IPX3 200 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 FAHD2BQ6P2I3 314 aaPredicted RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 OR1S2Q8NGQ3 325 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 TCEAL3Q969E4 200 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 FAHD2AQ96GK7 314 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF701Q9NV72 531 aaPredicted RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 COA4Q9NYJ1 87 aa17.11■□□□□ 0.33
RCCD1-201ENST00000394258 FOXD3Q9UJU5 478 aaPredicted RBP17.11■□□□□ 0.33
RCCD1-201ENST00000394258 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 CCDC187A0A096LP49 1063 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 A0A0B4J2A0 478 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 ANGPTL7O43827 346 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 TDGF1P13385 188 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 PRF1P14222 555 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 B4GALT1P15291 398 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 GLRA1P23415 457 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 DUSP3P51452 185 aaPredicted RBP17.1■□□□□ 0.33
RCCD1-201ENST00000394258 SUPT4H1P63272 117 aaKnown RBP17.1■□□□□ 0.33
RCCD1-201ENST00000394258 HFEQ30201 348 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 ANKRD55Q3KP44 614 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 NKAPLQ5M9Q1 402 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF774Q6NX45 483 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 C6orf201Q7Z4U5 140 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 SGK3Q96BR1 496 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 RTBDNQ9BSG5 229 aaPredicted RBP17.1■□□□□ 0.33
RCCD1-201ENST00000394258 SHPKQ9UHJ6 478 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 YKT6O15498 198 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 P04436 131 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 HPNP05981 417 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM128Q5BJH2 165 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 GALNTL5Q7Z4T8 443 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 OR5AP2Q8NGF4 316 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 EHFQ9NZC4 300 aa17.1■□□□□ 0.33
RCCD1-201ENST00000394258 MSGN1A6NI15 193 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 CXCL13O43927 109 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 CER1O95813 267 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 IGLV3-1P01715 115 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 TCN2P20062 427 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 PVALBP20472 110 aaPredicted RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 ACKR3P25106 362 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 THBS4P35443 961 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 RAB13P51153 203 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 CARD18P57730 90 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 SRSF3P84103 164 aaKnown RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 PAN3Q58A45 887 aaKnown RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 WIPI1Q5MNZ9 446 aaPredicted RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 ZSCAN4Q8NAM6 433 aaPredicted RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 AKR7LQ8NHP1 331 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 OCSTAMPQ9BR26 566 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 HDHD3Q9BSH5 251 aaPredicted RBP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 CHST5Q9GZS9 411 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM231Q9H6L2 316 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 ASF1BQ9NVP2 202 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 V9GYS6 101 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 IGKV1D-8A0A087WSZ0 117 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 A0A0U1RQV5 110 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 FAM230AA0A1W2PPH8 454 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 GP1BAP07359 652 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM225BP0DP42 221 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 HGFACQ04756 655 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 TRA2AQ13595 282 aaKnown RBP eCLIP17.09■□□□□ 0.33
RCCD1-201ENST00000394258 AADACL3Q5VUY0 350 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM200AQ86VY9 491 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 C20orf196Q8IYI0 205 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 OR5T2Q8NGG2 359 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 SPTSSAQ969W0 71 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 PECRQ9BY49 303 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 FAM117AQ9C073 453 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 ANAPC10Q9UM13 185 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
RCCD1-201ENST00000394258 PRSS44E7EML9 344 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 SGCEO43556 437 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 SPRY1O43609 319 aaPredicted RBP17.08■□□□□ 0.33
RCCD1-201ENST00000394258 SUCLG1P53597 346 aaKnown RBP17.08■□□□□ 0.33
RCCD1-201ENST00000394258 MTCP1P56278 107 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 PNLIPRP3Q17RR3 467 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 VAX1Q5SQQ9 334 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM17Q86X19 198 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 FAM89BQ8N5H3 189 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 OR10C1Q96KK4 312 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 OR5AC2Q9NZP5 309 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF581Q9P0T4 197 aa17.08■□□□□ 0.33
RCCD1-201ENST00000394258 DOCK10Q96BY6 2186 aa17.08■□□□□ 0.32
RCCD1-201ENST00000394258 LINC00587B1AMM8 73 aa17.08■□□□□ 0.32
RCCD1-201ENST00000394258 KNG1P01042 644 aa17.08■□□□□ 0.32
RCCD1-201ENST00000394258 IGHV3-9P01782 118 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms