RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HTR1FP30939 366 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 CDKN2AP42771 156 aaKnown RBP16.73■□□□□ 0.27
CCDC50-202ENST00000392456 C1orf185Q5T7R7 199 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 NPEPL1Q8NDH3 523 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 OR13C8Q8NGS7 320 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 FAM210BQ96KR6 192 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 PLA2G3Q9NZ20 509 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 FBXO7Q9Y3I1 522 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 A0A1W2PN81 502 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BKO60814 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 FBXO24O75426 580 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 TXNDC12O95881 172 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BJP06899 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ATF1P18846 271 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BOP23527 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BBP33778 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 CHRNA7P36544 502 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SLC16A1P53985 500 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BDP58876 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BCP62807 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 NHLH1Q02575 133 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST2H2BEQ16778 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 CHRFAM7AQ494W8 412 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SLC25A53Q5H9E4 307 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 MEPCEQ7L2J0 689 aaKnown RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 JAGN1Q8N5M9 183 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 NAXEQ8NCW5 288 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 OR51G2Q8NGK0 314 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF417Q8TAU3 575 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BHQ93079 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 KIRREL1Q96J84 757 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SGCZQ96LD1 299 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 GPX7Q96SL4 187 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF587Q96SQ5 575 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BNQ99877 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HIST1H2BMQ99879 126 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SEPSECSQ9HD40 501 aaKnown RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 H2AFY2Q9P0M6 372 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF346Q9UL40 294 aaKnown RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SIRT4Q9Y6E7 314 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SMCO3A2RU48 225 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ARPC3O15145 178 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 GGCTO75223 188 aaKnown RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SLC2A5P22732 501 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HTR2CP28335 458 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 BDH1Q02338 343 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 LINC00696Q6ZRV3 163 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 HPSE2Q8WWQ2 592 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 PIK3IP1Q96FE7 263 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 TSSK2Q96PF2 358 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SLITRK2Q9H156 845 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 ISG20L2Q9H9L3 353 aaKnown RBP16.72■□□□□ 0.27
CCDC50-202ENST00000392456 LPAR3Q9UBY5 353 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 SPTBN4Q9H254 2564 aa16.72■□□□□ 0.27
CCDC50-202ENST00000392456 PINLYPA6NC86 204 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 H7C1C5 153 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 DVL1O14640 695 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 ZIC3O60481 467 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 TPT1P13693 172 aaKnown RBP16.71■□□□□ 0.27
CCDC50-202ENST00000392456 DCTDP32321 178 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 CD80P33681 288 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 CYB561P49447 251 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 LCN6P62502 163 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 EIF5AP63241 154 aaKnown RBP16.71■□□□□ 0.27
CCDC50-202ENST00000392456 OR7A5Q15622 319 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 TERB2Q8NHR7 220 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 SLC25A38Q96DW6 304 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 SIGLEC12Q96PQ1 595 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 TSPAN32Q96QS1 320 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 DIRC2Q96SL1 478 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 HES7Q9BYE0 225 aa16.71■□□□□ 0.27
CCDC50-202ENST00000392456 AHSA1O95433 338 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 FCGR3AP08637 254 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 RFPL3SP0C7P2 107 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 HLA-DOBP13765 273 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 CD82P27701 267 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 CCDC107Q8WV48 283 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 ADGRG7Q96K78 797 aa16.71■□□□□ 0.26
CCDC50-202ENST00000392456 A0A1W2PNR3 127 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 FAM171A2A8MVW0 826 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 NEURL1O76050 574 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 MRPL3P09001 348 aaKnown RBP16.7■□□□□ 0.26
CCDC50-202ENST00000392456 DPP4P27487 766 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 OR3A1P47881 315 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 NCR3LG1Q68D85 454 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 ZNF573Q86YE8 665 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 CMTM4Q8IZR5 234 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 OR4K15Q8NH41 348 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 TMED6Q8WW62 240 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 LRFN1Q9P244 771 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 HDGFL3Q9Y3E1 203 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 DCDC2BA2VCK2 349 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 M0R036 132 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 SIAH2O43255 324 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 DXOO77932 396 aaKnown RBP16.7■□□□□ 0.26
CCDC50-202ENST00000392456 LIPCP11150 499 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 SERPINF1P36955 418 aa16.7■□□□□ 0.26
CCDC50-202ENST00000392456 SRSF4Q08170 494 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms