RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TMEM268Q5VZI3 342 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 KCTD18Q6PI47 426 aaPredicted RBP15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 CARFQ8N187 725 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 FAM71E2Q8N5Q1 922 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 BSCL2Q96G97 398 aaPredicted RBP15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 EFNA2O43921 213 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 CST4P01036 141 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 CXCL12P48061 93 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 SLC26A5P58743 744 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 POU3F1Q03052 451 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 POC1AQ8NBT0 407 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 CCDC54Q8NEL0 328 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 OR56B1Q8NGI3 324 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 BANF2Q9H503 90 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 TUBA4BQ9H853 241 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 DOK5Q9P104 306 aa15.58■□□□□ 0.08
SQSTM1-202ENST00000389805 GLO1Q04760 184 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 FOXF1Q12946 379 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 C1orf100Q5SVJ3 147 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 DCXRQ7Z4W1 244 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ERGIC1Q969X5 290 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 RTBDNQ9BSG5 229 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 GAR1Q9NY12 217 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 OR52A1Q9UKL2 312 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 STARD10Q9Y365 291 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 SDK2Q58EX2 2172 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 RALGAPA1Q6GYQ0 2036 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 TMEM269A0A1B0GVZ9 245 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 A0A1W2PP11 408 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 SOCS1O15524 211 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 SCRG1O75711 98 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF708P17019 499 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 MPZP25189 248 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 PMELP40967 661 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 EMP2P54851 167 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 RPS23P62266 143 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 CCL7P80098 99 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 HMGN3Q15651 99 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 IAH1Q2TAA2 248 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF529Q6P280 563 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF248Q8NDW4 579 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ST6GALNAC5Q9BVH7 336 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 CHST5Q9GZS9 411 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 KCNJ16Q9NPI9 418 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 PRH1P02810 166 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 LYL1P12980 280 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 FSTP19883 344 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 DHPSP49366 369 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF343Q6P1L6 599 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 SPNS3Q6ZMD2 512 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 ANGPTL5Q86XS5 388 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 OR1J1Q8NGS3 322 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 MR1Q95460 341 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 PRDM13Q9H4Q3 707 aa15.57■□□□□ 0.08
SQSTM1-202ENST00000389805 MPIG6BO95866 241 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 CDX1P47902 265 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 CAMLGP49069 296 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 C17orf67Q0P5P2 114 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 GAMTQ14353 236 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF674Q2M3X9 581 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 KMT5CQ86Y97 462 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 TMEM234Q8WY98 164 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 GFOD1Q9NXC2 390 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 KLRF1Q9NZS2 232 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 WNT16Q9UBV4 365 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 RHBDD3Q9Y3P4 386 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 CPAMD8Q8IZJ3 1885 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 NPIPA5E9PKD4 350 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 PET100P0DJ07 73 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 RAP1AP62834 184 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 ROM1Q03395 351 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 TLE3Q04726 772 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 OR52N5Q8NH56 324 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 C5orf34Q96MH7 638 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 DNAJB11Q9UBS4 358 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 NPIPA1Q9UND3 350 aa15.56■□□□□ 0.08
SQSTM1-202ENST00000389805 COL5A1P20908 1838 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 RAMP1O60894 148 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 SURF2Q15527 256 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 SLC26A10Q8NG04 563 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 OR10G3Q8NGC4 313 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 ADAT3Q96EY9 351 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 SRPK3Q9UPE1 567 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 POMT1Q9Y6A1 747 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 ANKUB1A6NFN9 424 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 TAAR5O14804 337 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 ZNF84P51523 738 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 HIST2H3AQ71DI3 136 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 H1FNTQ75WM6 255 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 UBAC2Q8NBM4 344 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 ASB10Q8WXI3 467 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 SHDQ96IW2 340 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 SCRT1Q9BWW7 348 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 GPR61Q9BZJ8 451 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 OPA3Q9H6K4 179 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 G6PC2Q9NQR9 355 aa15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 PHF3Q92576 2039 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-202ENST00000389805 A0A0A6YYD4 124 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 HSPB2A8KAH6 182 aa15.54■□□□□ 0.08
SQSTM1-202ENST00000389805 OR2J2O76002 312 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms