RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 OR1F12Q8NHA8 337 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 BARX1Q9HBU1 254 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-201ENST00000388940 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 SDK2Q58EX2 2172 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 CCDC187A0A096LP49 1063 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 A0A0G2JMM0 328 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 A0A1W2PPB8 328 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 A0A1W2PRS3 328 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 KIR3DP1A8MWS1 328 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 LYL1P12980 280 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 NTF4P34130 210 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 SUPT4H1P63272 117 aaKnown RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 SSPNQ14714 243 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 DMRTC1Q5HYR2 192 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 OR10K1Q8NGX5 313 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 EMG1Q92979 244 aaKnown RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 PIGTQ969N2 578 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 MARC2Q969Z3 335 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 CPNE2Q96FN4 548 aaPredicted RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 CYYR1Q96J86 154 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 Q96M66 194 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 CRLF2Q9HC73 371 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF391Q9UJN7 358 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 C13orf42A0A1B0GVH6 325 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 OR6C6A6NF89 314 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 RRP8O43159 456 aaKnown RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 ECI1P42126 302 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 ZXDAP98168 799 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 ATXN7L3Q14CW9 347 aaPredicted RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 PAN3Q58A45 887 aaKnown RBP13.05□□□□□ -0.32
SCFD2-201ENST00000388940 RIPPLY2Q5TAB7 128 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 C1orf210Q8IVY1 113 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 RNF126Q9BV68 326 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 EHFQ9NZC4 300 aa13.05□□□□□ -0.32
SCFD2-201ENST00000388940 TEX13DA0A0J9YY54 714 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 F8VVB4 439 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 F8VWA3 439 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ACKR3P25106 362 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 OTX2P32243 289 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 CHRFAM7AQ494W8 412 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 BEX5Q5H9J7 111 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ACER2Q5QJU3 275 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 C6orf15Q6UXA7 325 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ASCL4Q6XD76 172 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 OR2V1Q8NHB1 315 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 REEP6Q96HR9 211 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF75AQ96N20 296 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ZPBPQ9BS86 351 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 METTL9Q9H1A3 318 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 GPR160Q9UJ42 338 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 CSAG2Q9Y5P2 127 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 KLF2Q9Y5W3 355 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 SERPINA7P05543 415 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 RFPL3SP0C7P2 107 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 MTCP1P56278 107 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 RPS18P62269 152 aaKnown RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 CNN3Q15417 329 aaKnown RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF774Q6NX45 483 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 DBX2Q6ZNG2 339 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 ELL3Q9HB65 397 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-201ENST00000388940 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 COQ3Q9NZJ6 369 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 HSF4Q9ULV5 492 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 EDARQ9UNE0 448 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 TIMM10BQ9Y5J6 103 aa13.04□□□□□ -0.32
SCFD2-201ENST00000388940 RTTNQ86VV8 2226 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 F5H0A9 414 aaPredicted RBP13.03□□□□□ -0.32
SCFD2-201ENST00000388940 LGALS8O00214 317 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 CXCL13O43927 109 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 TMEM225BP0DP42 221 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 TCN2P20062 427 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 NAAAQ02083 359 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 SLC9A3R2Q15599 337 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 ANKRD55Q3KP44 614 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
SCFD2-201ENST00000388940 PLXDC2Q6UX71 529 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF100Q8IYN0 542 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 MRPS24Q96EL2 167 aaKnown RBP13.03□□□□□ -0.32
SCFD2-201ENST00000388940 PIK3IP1Q96FE7 263 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 RGCCQ9H4X1 137 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 PLEKHJ1Q9NW61 149 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
SCFD2-201ENST00000388940 SERPINA5P05154 406 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF32P17041 273 aa13.03□□□□□ -0.32
SCFD2-201ENST00000388940 CNR1P21554 472 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms