RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 HLA-DQB1P01920 261 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 ETV6P41212 452 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 NPBWR2P48146 333 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 TRA2AQ13595 282 aaKnown RBP eCLIP7.09□□□□□ -1.27
CKAP2-203ENST00000378037 IZUMO4Q1ZYL8 232 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 RNFT1Q5M7Z0 435 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 VWA1Q6PCB0 445 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 ARHGEF39Q8N4T4 335 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 BMPERQ8N8U9 685 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 OR10V1Q8NGI7 309 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 HAVCR1Q96D42 359 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 CA10Q9NS85 328 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 NPAP1Q9NZP6 1156 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.27
CKAP2-203ENST00000378037 OGG1O15527 345 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 ACHEP22303 614 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 NTF4P34130 210 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 CBX5P45973 191 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 FNDC7Q5VTL7 733 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 C12orf45Q8N5I9 185 aaPredicted RBP7.09□□□□□ -1.27
CKAP2-203ENST00000378037 PAQR8Q8TEZ7 354 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 ZNF700Q9H0M5 742 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 PPP1R3CQ9UQK1 317 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 MED12LQ86YW9 2145 aa7.09□□□□□ -1.27
CKAP2-203ENST00000378037 A0A0B4J293 547 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 A0A1W2PPE3 182 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 A0A1W2PQD3 144 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 FTCDNL1E5RQL4 147 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 TUSC2O75896 110 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OR2F2O95006 317 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ACKR3P25106 362 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF616Q08AN1 781 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 MUC20Q8N307 709 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ZFP62Q8NB50 900 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 KCNG3Q8TAE7 436 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 CPNE4Q96A23 557 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 MED18Q9BUE0 208 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 CYB5R1Q9UHQ9 305 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 SORL1Q92673 2214 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 GABARAPH6UMI1 98 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 PHF1O43189 567 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 NEURL1O76050 574 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 HPP00738 406 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 APOC3P02656 99 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OPN1MWP04001 364 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 RAB40ALP0C0E4 278 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OPN1MW2P0DN77 364 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OPN1MW3P0DN78 364 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 CNR1P21554 472 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ATP1B3P54709 279 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ASAH1Q13510 395 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 GSG1Q2KHT4 349 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 PRAMEF6Q5VXH4 476 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF546Q86UE3 836 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OR5T1Q8NG75 326 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OR2Z1Q8NG97 314 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OR10S1Q8NGN2 331 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 OR6X1Q8NH79 312 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF519Q8TB69 540 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 RAB40AQ8WXH6 277 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 TRIM63Q969Q1 353 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 TGIF2Q9GZN2 237 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 METTL9Q9H1A3 318 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 TMEM231Q9H6L2 316 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 MOV10Q9HCE1 1003 aaKnown RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ARHGAP32A7KAX9 2087 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 IGHV3OR15-7A0A075B7D8 119 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 F5H5P2 479 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF254O75437 659 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 VAMP5O95183 116 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 IL2RAP01589 272 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 FCGR2CP31995 323 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 PTGFRP43088 359 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 TAS2R19P59542 299 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 RBMS2Q15434 407 aaKnown RBP7.08□□□□□ -1.28
CKAP2-203ENST00000378037 UBE2V2Q15819 145 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 RAB12Q6IQ22 244 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 LYPD8Q6UX82 237 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 DOK3Q7L591 496 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 DNTTIP1Q9H147 329 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 WDR13Q9H1Z4 485 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 GPR35Q9HC97 309 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 NUBP2Q9Y5Y2 271 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 SESN1Q9Y6P5 492 aa7.08□□□□□ -1.28
CKAP2-203ENST00000378037 LOC102725191A0A1B0GVB3 256 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF705EA8MWA4 302 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 NTN3O00634 580 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 GK2Q14410 553 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 SMCO1Q147U7 214 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 PAN3Q58A45 887 aaKnown RBP7.07□□□□□ -1.28
CKAP2-203ENST00000378037 GFRALQ6UXV0 394 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 LINC00114Q6XXX2 140 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 MDP1Q86V88 176 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 CATSPERDQ86XM0 798 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 LRRC75AQ8NAA5 344 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 HSD17B11Q8NBQ5 300 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 MINDY2Q8NBR6 621 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 ZBTB44Q8NCP5 570 aa7.07□□□□□ -1.28
CKAP2-203ENST00000378037 M1APQ8TC57 530 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms