RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 ALKBH3Q96Q83 286 aaPredicted RBP4.89□□□□□ -1.63
SSX3-202ENST00000376893 UCK2Q9BZX2 261 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 SLC38A1Q9H2H9 487 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 UBQLN4Q9NRR5 601 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 NUDT15Q9NV35 164 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 CLCF1Q9UBD9 225 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 ICAM5Q9UMF0 924 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 RHBDD3Q9Y3P4 386 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 SPTAN1Q13813 2472 aaKnown RBP4.89□□□□□ -1.63
SSX3-202ENST00000376893 DSPPQ9NZW4 1301 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 USP9YO00507 2555 aaPredicted RBP4.89□□□□□ -1.63
SSX3-202ENST00000376893 CSMD1Q96PZ7 3565 aa4.89□□□□□ -1.63
SSX3-202ENST00000376893 CNTRLQ7Z7A1 2325 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 SAA2-SAA4A0A096LPE2 208 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 A0A1W2PQD3 144 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 OR6C65A6NJZ3 312 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RNF212BA8MTL3 300 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 EEF1E1-BLOC1S5C9J1V9 151 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TNFSF11O14788 317 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 MRASO14807 208 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 CLOCKO15516 846 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 EEF1E1O43324 174 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 CBR3O75828 277 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 CLPTM1O96005 669 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ACTL6AO96019 429 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 OPN1SWP03999 348 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ZNF43P17038 809 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TUBG1P23258 451 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 CCKARP32238 428 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 GCKP35557 465 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ZNF136P52737 540 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ATP12AP54707 1039 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 HOXC5Q00444 222 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TFF3Q07654 80 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 FHL2Q14192 279 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 PON3Q15166 354 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RGNQ15493 299 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ZNF141Q15928 474 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TRMT5Q32P41 509 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 TP53I3Q53FA7 332 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 MRPL2Q5T653 305 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 ENPP6Q6UWR7 440 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 VRK2Q86Y07 508 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 ERI1Q8IV48 349 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 FNDC9Q8TBE3 224 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 SMAP2Q8WU79 429 aaPredicted RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 PHF10Q8WUB8 498 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 IL1F10Q8WWZ1 152 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 DDB2Q92466 427 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RCN3Q96D15 328 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 FAM218AQ96MZ4 157 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TRNT1Q96Q11 434 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 MBOAT4Q96T53 435 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RSPO3Q9BXY4 272 aaPredicted RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 SRXN1Q9BYN0 137 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RACGAP1Q9H0H5 632 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 RANBP3Q9H6Z4 567 aaPredicted RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 PTGES2Q9H7Z7 377 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 SAR1AQ9NR31 198 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 TUBG2Q9NRH3 451 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 EXD2Q9NVH0 621 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 EIF3KQ9UBQ5 218 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 ZNF443Q9Y2A4 671 aaPredicted RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 MRPS18CQ9Y3D5 142 aaKnown RBP4.88□□□□□ -1.63
SSX3-202ENST00000376893 ZNF337Q9Y3M9 751 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 SVILO95425 2214 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 DOPEY2Q9Y3R5 2298 aa4.88□□□□□ -1.63
SSX3-202ENST00000376893 NCOA6Q14686 2063 aaPredicted RBP4.87□□□□□ -1.63
SSX3-202ENST00000376893 POLEQ07864 2286 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 IGHV3-15A0A0B4J1V0 119 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 IGHV2-70DA0A0C4DH43 119 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 A0A1W2PP18 115 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 SLC22A20A6NK97 555 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 P2RY10O00398 339 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 DLGAP1O14490 977 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 DYNC1I1O14576 645 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 ATP8B1O43520 1251 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 AQP8O94778 261 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 NTN1O95631 604 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 KRT75O95678 551 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 GAPDHP04406 335 aaKnown RBP4.87□□□□□ -1.63
SSX3-202ENST00000376893 TFPTP0C1Z6 253 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 GKN3PP0CG01 181 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 HTR1EP28566 365 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 CHRNB4P30926 498 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 LCN1P31025 176 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 BCAP31P51572 246 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 P2RX1P51575 399 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 CRISP3P54108 245 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 XGP55808 180 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 FADDQ13158 208 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 SRSF7Q16629 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
SSX3-202ENST00000376893 CYP51A1Q16850 503 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 LIN52Q52LA3 116 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 DEGS2Q6QHC5 323 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 LACC1Q8IV20 430 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 NRACQ8N912 160 aa4.87□□□□□ -1.63
SSX3-202ENST00000376893 SDR9C7Q8NEX9 313 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms