RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 DRGXA6NNA5 263 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 SPINK4O60575 86 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 CST7O76096 145 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 CLEC2LP0C7M8 214 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 SHBQ15464 509 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 CST9Q5W186 159 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 TMEM64Q6YI46 380 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 NARFLQ9H6Q4 476 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 CD1BP29016 333 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 TIAL1Q01085 375 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS13A-205ENST00000376636 FZD2Q14332 565 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 HDAC8Q9BY41 377 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 PIPOXQ9P0Z9 390 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 LPAR3Q9UBY5 353 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 SNED1Q8TER0 1413 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 H3BNC9 293 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 CAMKMTQ7Z624 323 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 FUNDC1Q8IVP5 155 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 ANKRD36A6QL64 1941 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 H3BP45 60 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 LIM2P55344 173 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 BATF2Q8N1L9 274 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 ACTL6AO96019 429 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF788Q6ZQV5 615 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 C16orf70Q9BSU1 422 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 RASL12Q9NYN1 266 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 CA2P00918 260 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 DUSP5Q16690 384 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 FAM24BQ8N5W8 94 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 TM4SF18Q96CE8 201 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 KTI12Q96EK9 354 aaPredicted RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 HIST1H1EP10412 219 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 DUSP8Q13202 625 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 APOBEC3DQ96AK3 386 aaPredicted RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 TRMT61AQ96FX7 289 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 OXGR1Q96P68 337 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 ZC3H12DA2A288 527 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 DNAL4O96015 105 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 NUDCD2Q8WVJ2 157 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 MAST2Q6P0Q8 1798 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 TMPRSS11DO60235 418 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 GPX2P18283 190 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 KLRB1Q12918 225 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 BCDIN3DQ7Z5W3 292 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 OR1B1Q8NGR6 318 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 PRRX1P54821 245 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 COL9A2Q14055 689 aaPredicted RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 A0A1W2PPC4 97 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 SLURP2P0DP57 97 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 LGALS7P47929 136 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 LPAL2Q16609 132 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 FAAP20Q6NZ36 180 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 DUSP18Q8NEJ0 188 aa10.5□□□□□ -0.73
VPS13A-205ENST00000376636 KLF13Q9Y2Y9 288 aaPredicted RBP10.5□□□□□ -0.73
VPS13A-205ENST00000376636 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 SIGIRRQ6IA17 410 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 PRSS21Q9Y6M0 314 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 MASP2O00187 686 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 SLCO2B1O94956 709 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 IGHV3-9P01782 118 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 ACAA1P09110 424 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 HLA-GP17693 338 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 GAMTQ14353 236 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 RGS7BPQ6MZT1 257 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 DHRS4L2Q6PKH6 230 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 SLCO4C1Q6ZQN7 724 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 C12orf76Q8N812 135 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 PTPRZ1P23471 2315 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 IGHA1P01876 353 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 IGHA2P01877 340 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 KIR3DL2P43630 455 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 DIO1P49895 249 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 HSF5Q4G112 596 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 SLC25A26Q70HW3 274 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 MCHR2Q969V1 340 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 TEX101Q9BY14 249 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 AKIRIN1Q9H9L7 192 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 GP1BAP07359 652 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 MICBQ29980 383 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 SLC2A10O95528 541 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 PPP1CCP36873 323 aaKnown RBP10.49□□□□□ -0.73
VPS13A-205ENST00000376636 CEACAM3P40198 252 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF121P58317 390 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms