RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 BCO1Q9HAY6 547 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 GSTP1P09211 210 aaKnown RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 TBPP20226 339 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SLC37A1P57057 533 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 MICBQ29980 383 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 OSR2Q8N2R0 312 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SEH1LQ96EE3 360 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SH3BGRL2Q9UJC5 107 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 STRAPQ9Y3F4 350 aaKnown RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SCN8AQ9UQD0 1980 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CER1O95813 267 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ERGP11308 486 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 GABRA1P14867 456 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 LAMTOR1Q6IAA8 161 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SLC22A18ASQ8N1D0 253 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 KCNJ15Q99712 375 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CRLF2Q9HC73 371 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 TIMM10BQ9Y5J6 103 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FAM74A7A6NL05 159 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 HBE1P02100 147 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FABP4P15090 132 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PSMB3P49720 205 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 GUK1Q16774 197 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FAM74A3Q4VXF1 159 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 GGNBP1Q5YKI7 109 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SLC25A26Q70HW3 274 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 RTN4IP1Q8WWV3 396 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FBXL17Q9UF56 701 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SIT1Q9Y3P8 196 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 LOC105371267A0A1B0GV96 52 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 MEX3AA1L020 520 aaKnown RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 HLA-DQB1P01920 261 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 BCKDHBP21953 392 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 UBE2G2P60604 165 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 MSMO1Q15800 293 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF429Q86V71 674 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 C9orf40Q8IXQ3 194 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 NUBPLQ8TB37 319 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ADAT3Q96EY9 351 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 HDHD3Q9BSH5 251 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 NMES1Q9C002 83 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FZR1Q9UM11 496 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PTGFRP43088 359 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 FAM185AQ8N0U4 392 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 DEFB127Q9H1M4 99 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 RAB18Q9NP72 206 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 PSENENQ9NZ42 101 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CD37P11049 281 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 RAB4AP20338 218 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF528Q3MIS6 628 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CXorf67Q86X51 503 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 LFNGQ8NES3 379 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 AICDAQ9GZX7 198 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CABIN1Q9Y6J0 2220 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 CCDC187A0A096LP49 1063 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PR80 420 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 OR4C45A6NMZ5 311 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SEMA7AO75326 666 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 PNLIPP16233 465 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 PTGER4P35408 488 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SMAD4Q13485 552 aaKnown RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 RBMS3Q6XE24 437 aaKnown RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 LRP11Q86VZ4 500 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TET1Q8NFU7 2136 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 THBS4P35443 961 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SHBQ15464 509 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TBC1D28Q2M2D7 210 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 OR2T2Q6IF00 324 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SLC25A42Q86VD7 318 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ASB5Q8WWX0 329 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TUBG2Q9NRH3 451 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 MED9Q9NWA0 146 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TP53BP1Q12888 1972 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 MDFIC2A0A1B0GVS7 189 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 C7orf66A4D0T2 115 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 MT-CO2P00403 227 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 HLA-HP01893 362 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ARG1P05089 322 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ADRA2CP18825 462 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 FOXK1P85037 733 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 EXT1Q16394 746 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 GUCA2BQ16661 112 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 RPS4Y2Q8TD47 263 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 GNRHR2Q96P88 292 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 GABRG3Q99928 467 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 PRO1933Q9H354 126 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 SPP1P10451 314 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 FGF7P21781 194 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 H2BFSP57053 126 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ZXDAP98168 799 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TRIM61Q5EBN2 209 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 NCMAPQ5T1S8 102 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 MRPS24Q96EL2 167 aaKnown RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 IFT22Q9H7X7 185 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 MTCH2Q9Y6C9 303 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TANC1Q9C0D5 1861 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TPRP12270 2363 aaKnown RBP5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TRIM64BA6NI03 449 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 TUSC1Q2TAM9 212 aa5.81□□□□□ -1.48
SMC1A-202ENST00000375340 ZDHHC23Q8IYP9 409 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms