RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 A0A1W2PR48 441 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 F5H5K5 113 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 TYROBPO43914 113 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 GATA3P23771 443 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 TCTAP57738 103 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 CLRN1P58418 232 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PAX2Q02962 417 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 FCN2Q15485 313 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 UNC50Q53HI1 259 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 ZNF343Q6P1L6 599 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 OR1N2Q8NGR9 330 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 ARRDC2Q8TBH0 407 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 ISL2Q96A47 359 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 OR52B2Q96RD2 323 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 TRIB3Q96RU7 358 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 DPCDQ9BVM2 203 aaPredicted RBP7.88□□□□□ -1.15
UBR4-201ENST00000375218 GTSF1LQ9H1H1 148 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 FGF20Q9NP95 211 aaPredicted RBP7.88□□□□□ -1.15
UBR4-201ENST00000375218 LRP4O75096 1905 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 TICRRQ7Z2Z1 1910 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 LRIT2A6NDA9 550 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRORSD1PA6NEY8 169 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 SAP18O00422 153 aaKnown RBP7.88□□□□□ -1.15
UBR4-201ENST00000375218 TCN2P20062 427 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 GGT2P36268 569 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 CCL23P55773 120 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRR20EP86478 221 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRR20CP86479 221 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRR20DP86480 221 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRR20BP86481 221 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PRR20AP86496 221 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 HHEXQ03014 270 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 ODF4Q2M2E3 257 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 PYCR3Q53H96 274 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 TEX261Q6UWH6 196 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 SLC35F2Q8IXU6 374 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 WDR31Q8NA23 367 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 VN1R2Q8NFZ6 395 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 DCUN1D4Q92564 292 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 DUX3Q96PT4 197 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 FAM96AQ9H5X1 160 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 ADGRL4Q9HBW9 690 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 UBQLN4Q9NRR5 601 aa7.88□□□□□ -1.15
UBR4-201ENST00000375218 CORTO00230 105 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 MRASO14807 208 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 CRADDP78560 199 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 MRPS34P82930 218 aaKnown RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 HIST2H2ACQ16777 129 aaPredicted RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 TMEM52BQ4KMG9 183 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 SLC36A1Q7Z2H8 476 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 PITPNM3Q9BZ71 974 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 NKX6-2Q9C056 277 aaPredicted RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 SAR1AQ9NR31 198 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 EXOSC1Q9Y3B2 195 aaKnown RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 IQCMA0A1B0GVH7 501 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 ASPDHA6ND91 283 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 S1PR4O95977 384 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 HIST1H2ABP04908 130 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 HAPLN1P10915 354 aaPredicted RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 FSTP19883 344 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 HIST1H2ADP20671 130 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 HIST3H2AQ7L7L0 130 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 OR2W3Q7Z3T1 314 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 SFTPA1Q8IWL2 248 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 OR52E4Q8NGH9 312 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 ZNF347Q96SE7 839 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 C20orf85Q9H1P6 137 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 SCN3BQ9NY72 215 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 JKAMPQ9P055 326 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 DEGS1O15121 323 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 C8BP07358 591 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 PPIAL4GP0DN37 164 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 TMEM225BP0DP42 221 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 CERS1P27544 350 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 GNG5P63218 68 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 SLC25A52Q3SY17 297 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 PHLDA2Q53GA4 152 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 ZNF66Q6ZN08 573 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 LINC00336Q6ZUF6 198 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 OR4M1Q8NGD0 313 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 HIST1H2BAQ96A08 127 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 RCHY1Q96PM5 261 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 PDFQ9HBH1 243 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 A4GALTQ9NPC4 353 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 FGF21Q9NSA1 209 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 J3KR12 359 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 WISP3O95389 354 aaPredicted RBP7.87□□□□□ -1.15
UBR4-201ENST00000375218 UCHL1P09936 223 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 EMP1P54849 157 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 CLDN20P56880 219 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 RAB8AP61006 207 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 DYNLT1P63172 113 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 KIRREL2Q6UWL6 708 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 LINC01561Q8N1V8 128 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 FAAP24Q9BTP7 215 aa7.87□□□□□ -1.15
UBR4-201ENST00000375218 A0A1W2PPE3 182 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms