RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
HMGCL-203ENST00000374490 ZNF799Q96GE5 643 aa12.22□□□□□ -0.45
HMGCL-203ENST00000374490 SGCZQ96LD1 299 aa12.22□□□□□ -0.45
HMGCL-203ENST00000374490 OSGIN2Q9Y236 505 aa12.22□□□□□ -0.45
HMGCL-203ENST00000374490 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
HMGCL-203ENST00000374490 PKD1L2Q7Z442 2459 aa12.21□□□□□ -0.45
HMGCL-203ENST00000374490 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 FIGNL2A6NMB9 653 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 NUDT19A8MXV4 375 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 F8VVB4 439 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 F8VWA3 439 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 SMAD9O15198 467 aaKnown RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 RAD51DO75771 328 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 CNR1P21554 472 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 SRD5A2P31213 254 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 SNU13P55769 128 aaKnown RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 DCUN1D4Q92564 292 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 ZPBPQ9BS86 351 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 PECRQ9BY49 303 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 AKIRIN1Q9H9L7 192 aaPredicted RBP12.21□□□□□ -0.46
HMGCL-203ENST00000374490 PROK2Q9HC23 129 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 DKK4Q9UBT3 224 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 ZNF391Q9UJN7 358 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 MEMO1Q9Y316 297 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 CSAG2Q9Y5P2 127 aa12.21□□□□□ -0.46
HMGCL-203ENST00000374490 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 OR5H15A6NDH6 313 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 F5H5K5 113 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 STMND1H3BQB6 276 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 CELA2AP08217 269 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 CST2P09228 141 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 JMJD7P0C870 316 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 FCGR2AP12318 317 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 LYL1P12980 280 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 PRKACBP22694 351 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 NPY4RP50391 375 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 PHYHD1Q5SRE7 291 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 CLEC18BQ6UXF7 455 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 TFAP2EQ6VUC0 442 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 GPR137CQ8N3F9 429 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 RELL2Q8NC24 303 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 OR5AP2Q8NGF4 316 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 MRPS24Q96EL2 167 aaKnown RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 DMRTA2Q96SC8 542 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 RBM24Q9BX46 236 aaKnown RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 C1QTNF6Q9BXI9 259 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 PIGMQ9H3S5 423 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 LDAHQ9H6V9 325 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 BARX1Q9HBU1 254 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 GPR160Q9UJ42 338 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 EDARQ9UNE0 448 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
HMGCL-203ENST00000374490 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 CACNA1CQ13936 2221 aa12.2□□□□□ -0.46
HMGCL-203ENST00000374490 A0A1W2PP11 408 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 HPNP05981 417 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 ICAM2P13598 275 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 RAC3P60763 192 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 PPIAP62937 165 aaKnown RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 CNN3Q15417 329 aaKnown RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 CHRFAM7AQ494W8 412 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 SEMA6DQ8NFY4 1073 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 PIK3IP1Q96FE7 263 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 C2orf50Q96LR7 162 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 JSRP1Q96MG2 331 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 PLEK2Q9NYT0 353 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 TAS2R3Q9NYW6 316 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 EHFQ9NZC4 300 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 ALPK2Q86TB3 2170 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 A0A0J9YW62 118 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 P04436 131 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 FAHP16930 419 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 SERPINA2P20848 420 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 CRYGSP22914 178 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 UBE2V2Q15819 145 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms