RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 BLVRBP30043 206 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 CFHR1Q03591 330 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 SP6Q3SY56 376 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 CDCP2Q5VXM1 449 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 OR8B12Q8NGG6 310 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 OR10A2Q9H208 303 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 SH3BGRL3Q9H299 93 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 POMT1Q9Y6A1 747 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 XRCC2O43543 280 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 YIF1AO95070 293 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 CAMLGP49069 296 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 ZNF121P58317 390 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 CARD17Q5XLA6 110 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 OIT3Q8WWZ8 545 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 VN1R1Q9GZP7 353 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 FAM212BQ9NTI7 297 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 C1orf123Q9NWV4 160 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 FER1L5A0AVI2 2057 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 IGKV1-9A0A0C4DH69 117 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 A0A1W2PR77 199 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 C5orf63A6NC05 138 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 AP4M1O00189 453 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 RER1O15258 196 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 DIRAS3O95661 229 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 HPNP05981 417 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 SERPINA2P20848 420 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 CSNK1EP49674 416 aaKnown RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 EMG1Q92979 244 aaKnown RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 TAAR9Q96RI9 348 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 ZNF2Q9BSG1 426 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 LMAN1LQ9HAT1 526 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 ELL3Q9HB65 397 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-202ENST00000372748 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.33
COL9A2-202ENST00000372748 A0A1W2PQD3 144 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 HAAOP46952 286 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 HSD11B2P80365 405 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 FAM3AP98173 230 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 HMGN3Q15651 99 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 C14orf28Q4W4Y0 310 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 HSD17B11Q8NBQ5 300 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 OR1N1Q8NGS0 311 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 LIN37Q96GY3 246 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 WDR77Q9BQA1 342 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 HDHD3Q9BSH5 251 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 GAPDHP04406 335 aaKnown RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 CD27P26842 260 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 ASCL1P50553 236 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 DCAF7P61962 342 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 OPN5Q6U736 354 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 FAM57BQ71RH2 274 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 GGACTQ9BVM4 153 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 SUSD2Q9UGT4 822 aa13.01□□□□□ -0.33
COL9A2-202ENST00000372748 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
COL9A2-202ENST00000372748 MASP2O00187 686 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 TAS2R46P59540 309 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 WDSUB1Q8N9V3 476 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 UCK1Q9HA47 277 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 KCNJ16Q9NPI9 418 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 DHRS7CA6NNS2 312 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 E9PLN8 166 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 PPIHO43447 177 aaKnown RBP13□□□□□ -0.33
COL9A2-202ENST00000372748 ITGA3P26006 1051 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 ZNF239Q16600 458 aaKnown RBP13□□□□□ -0.33
COL9A2-202ENST00000372748 RSPO4Q2I0M5 234 aaPredicted RBP13□□□□□ -0.33
COL9A2-202ENST00000372748 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
COL9A2-202ENST00000372748 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 C6orf201Q7Z4U5 140 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 TMEM156Q8N614 296 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 UBAC2Q8NBM4 344 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 REEP6Q96HR9 211 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 GNRHR2Q96P88 292 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
COL9A2-202ENST00000372748 CA14Q9ULX7 337 aa13□□□□□ -0.33
COL9A2-202ENST00000372748 DANCRP0C864 163 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 FBXW4P57775 412 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 OR2B11Q5JQS5 317 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 TSPO2Q5TGU0 170 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 SGPP2Q8IWX5 399 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 OR2AJ1Q8NGZ0 328 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 TUBA4BQ9H853 241 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 CHST11Q9NPF2 352 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 RCL1Q9Y2P8 373 aaKnown RBP12.99□□□□□ -0.33
COL9A2-202ENST00000372748 MMP24Q9Y5R2 645 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
COL9A2-202ENST00000372748 WDFY3Q8IZQ1 3526 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms