RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 K7EPK0 472 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 SMAD9O15198 467 aaKnown RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF354AO60765 605 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 NDUFB8O95169 186 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 TAGLN2P37802 199 aaKnown RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 GLIPR1P48060 266 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PDLIM4P50479 330 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 BTN3A2P78410 334 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 MYO9BQ13459 2157 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 NFATC4Q14934 902 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 MIDNQ504T8 468 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ALG10BQ5I7T1 473 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 HMGN2P46Q86SG4 172 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 MAML2Q8IZL2 1156 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 FAM71E2Q8N5Q1 922 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 TSACCQ96A04 125 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PGAM5Q96HS1 289 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 C4orf36Q96KX1 117 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 BMFQ96LC9 184 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF681Q96N22 645 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 TBX5Q99593 518 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 FNDC11Q9BVV2 318 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ARV1Q9H2C2 271 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF430Q9H8G1 570 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 HINT3Q9NQE9 182 aaKnown RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 COA3Q9Y2R0 106 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 X6R8D5 127 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 TRAV39A0A0B4J263 110 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 H0YIZ8 118 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 RAB27BO00194 218 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PEX12O00623 359 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 VAMP5O95183 116 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 CD3DP04234 171 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 OR5H8P0DN80 308 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 LMO1P25800 156 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 EFNA3P52797 238 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 UBE2KP61086 200 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 RPS15AP62244 130 aaKnown RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 RPS11P62280 158 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 TGM3Q08188 693 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PGGHGQ32M88 737 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 KRTCAP3Q53RY4 240 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 NIPAL3Q6P499 406 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 RPTNQ6XPR3 784 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 MYPOPQ86VE0 399 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-203ENST00000372232 MCEMP1Q8IX19 187 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 NOXO1Q8NFA2 376 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 LIPHQ8WWY8 451 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PHB2Q99623 299 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 PBDC1Q9BVG4 233 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 ANGPTL4Q9BY76 406 aa7.83□□□□□ -1.16
ATG4A-203ENST00000372232 CCDC88CQ9P219 2028 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 J3QLW9 94 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 CH25HO95992 272 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 CD1AP06126 327 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF19P17023 458 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 SRMP19623 302 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 OR10J1P30954 320 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 BUD31P41223 144 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ARF6P62330 175 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
ATG4A-203ENST00000372232 RUNX2Q13950 521 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 CRMP1Q14194 572 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 HIKESHIQ53FT3 197 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF311Q5JNZ3 666 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 CLEC12AQ5QGZ9 265 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 RPL7L1Q6DKI1 246 aaKnown RBP7.82□□□□□ -1.16
ATG4A-203ENST00000372232 PRSS54Q6PEW0 395 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 FBXW12Q6X9E4 464 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 MEPCEQ7L2J0 689 aaKnown RBP7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF101Q8IZC7 436 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 NUP43Q8NFH3 380 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 OR5D18Q8NGL1 313 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 FLVCR1-AS1Q8TAF5 88 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ANKRD9Q96BM1 317 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-203ENST00000372232 SMIM19Q96E16 107 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 TECTBQ96PL2 329 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 PDE7BQ9NP56 450 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 SLC2A4RGQ9NR83 387 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF780BQ9Y6R6 833 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 URGCP-MRPS24S4R325 110 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 V9GY05 133 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 EYSQ5T1H1 3165 aa7.82□□□□□ -1.16
ATG4A-203ENST00000372232 CDHR4A6H8M9 788 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 H3BQ15 152 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 CST4P01036 141 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 OR13C7P0DN81 318 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 CX3CR1P49238 355 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 OR12D2P58182 307 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 RPS20P60866 119 aaKnown RBP7.81□□□□□ -1.16
ATG4A-203ENST00000372232 PRPS1P60891 318 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 CYCSP99999 105 aaKnown RBP7.81□□□□□ -1.16
ATG4A-203ENST00000372232 NHLH1Q02575 133 aa7.81□□□□□ -1.16
ATG4A-203ENST00000372232 MGAT2Q10469 447 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms