RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SEBOXQ9HB31 216 aaPredicted RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 LRFN1Q9P244 771 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 METTL1Q9UBP6 276 aaKnown RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 TUBD1Q9UJT1 453 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 FLVCR1Q9Y5Y0 555 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 USP24Q9UPU5 2620 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 C13orf42A0A1B0GVH6 325 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR5H15A6NDH6 313 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 FIGNL2A6NMB9 653 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 TMEM14DPA8MWL7 114 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 H0YIZ8 118 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 NPIPB7O75200 414 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 CSN2P05814 226 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 FCGR3AP08637 254 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 ZNF823P16415 610 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 AKR1C4P17516 323 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 PGCP20142 388 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 ABCD3P28288 659 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 PTGFRP43088 359 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 F2RL1P55085 397 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 SPOCK1Q08629 439 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 IL15RAQ13261 267 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 HABP2Q14520 560 aaPredicted RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR1C1Q15619 314 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR7A5Q15622 319 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 FAM76BQ5HYJ3 339 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR10K2Q6IF99 312 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 ZNF529Q6P280 563 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OPN5Q6U736 354 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 IGFL2Q6UWQ7 119 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR51A2Q8NGJ7 313 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 OR4K15Q8NH41 348 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 RRNAD1Q96FB5 475 aaKnown RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 ADAT1Q9BUB4 502 aaKnown RBP10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 CNTD2Q9H8S5 307 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 LUZP4Q9P127 313 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 PPP4R1LQ9P1A2 415 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 EDARQ9UNE0 448 aa10.07□□□□□ -0.8
TSPAN1-201ENST00000372003 MPDZO75970 2070 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 OR2T1O43869 369 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 GPANK1O95872 356 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 CST4P01036 141 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 SFTPCP11686 197 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 GP1BBP13224 206 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 RCC1P18754 421 aaPredicted RBP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 AGAP20933 346 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 S100PP25815 95 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 ECI1P42126 302 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 POLR2HP52434 150 aaKnown RBP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 FBXW4P57775 412 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 POLR2GP62487 172 aaKnown RBP eCLIP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 ZP4Q12836 540 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 UNC119Q13432 240 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 IGFL3Q6UXB1 125 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 NAA40Q86UY6 237 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 ANGPTL5Q86XS5 388 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 RBMXL3Q8N7X1 1067 aaKnown RBP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 GATSQ8NAP1 163 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 CHST4Q8NCG5 386 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 PPP1R14AQ96A00 147 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 SPACA9Q96E40 222 aaPredicted RBP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 MALSU1Q96EH3 234 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 ADOQ96SZ5 270 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 OCSTAMPQ9BR26 566 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 OR51M1Q9H341 326 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 ZMAT3Q9HA38 289 aaKnown RBP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 EMC9Q9Y3B6 208 aa10.06□□□□□ -0.8
TSPAN1-201ENST00000372003 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 A8MVM7 634 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 FAM157AC9JC47 383 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 H3BSH0 61 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 TO15178 435 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 SSX5O60225 188 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 NEURL1O76050 574 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 FABP1P07148 127 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 CTLA4P16410 223 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 IL12BP29460 328 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 TNFSF10P50591 281 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 FAM3AP98173 230 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 POC1AQ8NBT0 407 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 SLC26A10Q8NG04 563 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 OR10G3Q8NGC4 313 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 OR5D14Q8NGL3 314 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 KIRREL1Q96J84 757 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 HES7Q9BYE0 225 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 MOB1AQ9H8S9 216 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 FN3KRPQ9HA64 309 aa10.05□□□□□ -0.8
TSPAN1-201ENST00000372003 NOSIPQ9Y314 301 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms